Query= MSMg01no140_g08.b1 MSMg01no140_g08.b1 CHROMAT_FILE:
MSMg01no140_g08.b1 PHD_FILE: MSMg01no140_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:07 2005
(345 letters)
>mm_chr6_9916171_9916916
Length = 746
Score = 605 bits (313), Expect = e-177
Identities = 334/343 (97%), Gaps = 5/343 (1%)
Strand = Plus / Minus
Query: 4 gaattcttcttattctc---gtaaacagaattttcaacttcctaattaatgttagtctag 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaattcttcttat--acaaagtaaacagaattttcaacttcctaattaatgttagtctag 296
Query: 61 atggatttgaagataaaatctaatgtaaacaaaaataaagatcaatagaagattacgaga 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atggatttgaaaataaaatctaatgtaaacaaaaataaagatcaatagaagattacgaga 236
Query: 121 caagatggtactgatttaagtgattatcaaagaatttttaaaagaatttttaaaaattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 caagatggtactgatttaagtgattatcaaagaatttttaaaagaatttttaaaaattat 176
Query: 181 acttataacttttacttatacttataacttttaatgtttcttgggaaatgggaaaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 175 acttataacttttacttatacttataacttttaatgtttcttgggaaatgggaaaatcct 116
Query: 241 cttgatgacttcatataattttatcaatattttaattgattatgagtagtcaataacaat 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cttgatgacttgatataattttatcaatattttaattgattatgagtagtcaataacaat 56
Query: 301 taggtttcttaaaattgtttaccatttgaactaactttcatca 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 taggtttcttaaaattgtttaccatttgaactaactttcatca 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_g08.g1 MSMg01no140_g08.g1 CHROMAT_FILE:
MSMg01no140_g08.g1 PHD_FILE: MSMg01no140_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:07 2005
(199 letters)
>mm_chr6_9790688_9791286
Length = 599
Score = 321 bits (166), Expect = 2e-92
Identities = 190/198 (95%)
Strand = Plus / Plus
Query: 1 ttggctaacatgtttaatattacttaatacatatgaggagacaaacattaccatttttaa 60
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttggctaaaatgtttaatattacttaatacatatgaggagacaaaaattaccatttttaa 260
Query: 61 atgatggttaataattatttccaaattaaaggctgtatcctcagttaaccaagatattct 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 atgatggttaataattatttccaaattaaaggctgtatactcagttaaccaagatattct 320
Query: 121 tttttaattgaaaatagcttgaatcacaatcagaatacttttcataatttccaactgaac 180
||||||||||||||||| |||||||| |||||||||||||||||||||||| | |||||
Sbjct: 321 tttttaattgaaaatagtttgaatcagaatcagaatacttttcataatttctatgtgaac 380
Query: 181 agatgttaaaaaaaaaaa 198
||||||||||||||||||
Sbjct: 381 agatgttaaaaaaaaaaa 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
