Query= MSMg01no140_h04.b1 MSMg01no140_h04.b1 CHROMAT_FILE:
MSMg01no140_h04.b1 PHD_FILE: MSMg01no140_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:11 2005
(454 letters)
>mm_chr6_9293534_9294388
Length = 855
Score = 774 bits (400), Expect = 0.0
Identities = 440/456 (96%), Gaps = 7/456 (1%)
Strand = Plus / Minus
Query: 3 ggaattcttggacact---gcccatggaagtgaagtcctagatagccattttggaataag 59
|||||||||||||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 515 ggaattcttggacactgtggc---tggaagtgaagtcctagatagccattttagaataac 459
Query: 60 tgtttgacagtttctgcaaaatatgaatatatacatttgaaatcagaagttccaatcttg 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 458 tgtttgacagtttctgcaaaatatgaatatatacgtttgaaatcagaagttccaatcttg 399
Query: 120 aatatgttctctccgtatatatttctgtatacataagtgaacttgtatgaaagtacataa 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aatatgttctctccatatatatttctgtatacataagtgaacttgtatgaaagtacataa 339
Query: 180 gcaac-aaaaatcatatgtgtatataacatagattgattatatctaacgctgttacttaa 238
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gcaacaaaaaatcatatatgtatataacatagattgattatatctaacgctgttacttaa 279
Query: 239 ctccagccacatcatacccttacacatcaattatgatccttctgttgctgtgctttcttt 298
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 278 ctccagccacatcatacccttacacatcaattatgatccctctgttgctgtgcttccttt 219
Query: 299 cgctattgcttaactgcacatgtaaatgagaccttgtaacatttctctttctgagtttgg 358
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 cactattgcttaactgcacatgcaaatgagaccttgtaacatttctctttctgagtttgg 159
Query: 359 ttaatgtctgaaaatgctgatttctagtcttatccattttcctaaaagtgtcacaatttc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ttaatgtctgaaaatgctgatttctagtcttatccattttcctaaaagtgtcacaatttc 99
Query: 419 attactggttttggctctaataaaccttcactgtga 454
||||||||||||||||||||||||||||||||||||
Sbjct: 98 attactggttttggctctaataaaccttcactgtga 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_h04.g1 MSMg01no140_h04.g1 CHROMAT_FILE:
MSMg01no140_h04.g1 PHD_FILE: MSMg01no140_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:11 2005
(342 letters)
>mm_chr6_9195888_9196629
Length = 742
Score = 592 bits (306), Expect = e-173
Identities = 337/354 (95%), Gaps = 12/354 (3%)
Strand = Plus / Plus
Query: 1 cttcagcaacctcagccaaatgagtcagtccatgtgtccaatggtttgccttcattggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cttcagcaacctcagccaaatgagtcagtccatgtgtccaatggtttgccttcattggct 248
Query: 61 gttgcttcctgtaggttctgggttgtatttataaattgtgggtctaattgttgctttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttgcttcctgtaggttctgggttgtatttataaattgtgggtctaattgttgctttgaa 308
Query: 121 gccattagggaactggttactttgaatcc--------ct----gggctctttgagaaact 168
||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 309 gccattagggaactggttactttgaatcctttgagatctcaaaaggctctttgagaaatt 368
Query: 169 gtttcacaaaggcaagatgagatcttagagaatgtcctccaaatgtgactcttacaatct 228
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 369 gtttcacaaaggcaagatgagatcttggagaatgtcctccaaatgtgactcttacaatct 428
Query: 229 cactggaagtgatctctcaactttgtatgcttttcagattgtcaaatatctacctgctag 288
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cactggaagtgatctcccaactttgtatgcttttcagattgtcaaatatctacctgctag 488
Query: 289 tgaatattagcttacttcccttttcttaaaccacattttaagccctgaaattaa 342
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 489 tgaatattagcttacttctcttttcttaaaccacattttaagccctgaaattaa 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
