Query= MSMg01no140_p20.b1 MSMg01no140_p20.b1 CHROMAT_FILE:
MSMg01no140_p20.b1 PHD_FILE: MSMg01no140_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:54 2005
(626 letters)
>mm_chr6_98209270_98210294
Length = 1025
Score = 1116 bits (577), Expect = 0.0
Identities = 612/625 (97%), Gaps = 7/625 (1%)
Strand = Plus / Plus
Query: 5 gaattctttccttccca--gattttagagtgttaaaatcaaccttccgcaaagttagtat 62
||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattctttcc--cccatagattttagagtgttaaaatcaaccttccacaaagttagtat 262
Query: 63 aaaatttcaggtcttaaaaataatggcaactttt-taaagtgtttgggacatgtcaaagg 121
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 263 aaaatttcaggtcttaaaaataatggcaa-ttttataaagtgtttgggacatgtcaaagg 321
Query: 122 gtaagaaggggtcttcttttatctagaatgtttatttggtctacttattagtaatggcag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtaagaaggggtcttcttttatctagaatgtttatttggtctacttattagtaatggcag 381
Query: 182 gtctctggaaaattatttgcaaagcccacatactcattttagtctaggctttctggatga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtctctggaaaattatttgcaaagcccacatactcattttagtctaggctttctggatga 441
Query: 242 aagtattgtctaggagtctttgatataatctttcctgtttttattatttttttaaatggg 301
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 442 aagtattgtctaggagtctttgatataatctttcctgtttttattatttttt-aaatggg 500
Query: 302 tgaaaacatgggaaaagaaggatacccacatagataaaatatgggatggacacccctggt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaaacatgggaaaagaaggatacccacatagataaaatatgggatggacacccctggt 560
Query: 362 aaggaatcacacaaaacatcagtctattggaactgaaggacgctgttacttggcacctgt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggaatcacacaaaacatcagtctattggaactgaaggacgctgttacttggcacctgt 620
Query: 422 gctggctcatgtgagagtaagataaaccacctctgtgctttgctcgccctgtcaggagcc 481
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 gctggctcatgtgagagtaagatacaccacctctgtgctttgctcgccctgtcaggagcc 680
Query: 482 atagtttggctccatcagacagttgagtagccatcttctttttaatttttaatttttaat 541
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 681 atagtttggctccatcagacagttgagtagccatcttctttttaattttttattttttat 740
Query: 542 tttttttggaatgggacatagttcccactagactttcaaggaagaacttcataaagaaag 601
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttttgaaatggtacatagttcccactagactttcaaggaagaacttcataaagaaag 800
Query: 602 agaattatgatataatcgtgatgga 626
|||||||||||||||||||||||||
Sbjct: 801 agaattatgatataatcgtgatgga 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_p20.g1 MSMg01no140_p20.g1 CHROMAT_FILE:
MSMg01no140_p20.g1 PHD_FILE: MSMg01no140_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:54 2005
(614 letters)
>mm_chr6_98360746_98361759
Length = 1014
Score = 1077 bits (557), Expect = 0.0
Identities = 597/615 (97%), Gaps = 11/615 (1%)
Strand = Plus / Minus
Query: 1 acttacacttggggatgtgcgcaaggcatctgttcatgaatagcggaatgatgaccaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 acttacacttggggatgtgcgcaaggcatctgttcatgaatagcggaatgatgaccaagt 634
Query: 61 cctgatggggaaggcacactgccatctttccctgaaatacatcccaactgagaaatcaat 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cctgatggggaaggcacgctgccatctttccctgaaatacatcccaactgagaaatcaat 574
Query: 121 tgcttcatgcctgggttttcttgtatgtcgctttttccccattaaatataaaagtcctgt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 573 tgcttcatgcctgggttttcttgtatgtcgcttttttcccattaaatataaaagtcctgt 514
Query: 181 cgatgatttttttctaagccacctacttttatgctggatatttgttacacgacaaaggaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cgatga-ttttttctaagccacctacttttatgctggatatttgttacacgacaaaggaa 455
Query: 241 atgacctatcaggcgaaactcatctgtgtgttcctttatgtgtctacacttgaactttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgacctatcaggcgaaactcatctgtgtgttcctttatgtgtctacacttgaactttct 395
Query: 301 atgagaaattagtatttgattcactagctaggcatcatggctctgaatttcagaaatcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 394 atgagaaattagtatttgattcactagctaggcatcatggctctgaatttcaaaaatcat 335
Query: 361 ttttaattacatggtgcacaaaaaatacctcctaatctttcatctgccacaaaaaag-aa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 ttttaattacatggtgcacaaaaaatacctcctaatctttcatctgccacaaaaaagaaa 275
Query: 420 aaaaaaaacaacaatatgaatcatgttctaacccctacagtacctctagttagaagagct 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274 aaaaaaaacaacaatatgaatcatgttctaacccttacagtacctctagttagaagagct 215
Query: 480 aacagagtcatatacattcattcattcattcattcattgattcatgaaatagtttatatt 539
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 214 aacagagtcatatacattcattcattcattc--------attcatgaaatagtttatatt 163
Query: 540 ttgaactttaaata-tatgtttccattttgtatgtttaaaatttgatagatttcttcaca 598
|||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 162 ttgaactttaaatattatgttttcattttgtatgtttaaaatttgataaatttcttcaca 103
Query: 599 aagatcaggtagtcg 613
|||||||| ||||||
Sbjct: 102 aagatcagatagtcg 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
