Query= MSMg01no141_e03.b1 MSMg01no141_e03.b1 CHROMAT_FILE:
MSMg01no141_e03.b1 PHD_FILE: MSMg01no141_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:27 2005
(627 letters)
>mm_chr6_55621959_55622989
Length = 1031
Score = 998 bits (516), Expect = 0.0
Identities = 559/576 (97%), Gaps = 6/576 (1%)
Strand = Plus / Minus
Query: 1 ataaactcttgttcttttatggaataatgcacataatcactggccttttgccttgagcaa 60
||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 628 ataaactcttgttcttttatggaataatgcagagaatcactggccttttgcattgagcaa 569
Query: 61 aag----cggacacagagcaaccacagtaagactcagatcctttatctttgaagtaagaa 116
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 568 aagcggacggacacagagcaaccacagtaagactcagatccttcatctttgaagtaagaa 509
Query: 117 tgttgacacccatgtttccatgattctgtaaagaataaatgagatcactgatgagacatc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgttgacacccatgtttccatgattctgtaaagaataaatgagatcactgatgagacatc 449
Query: 177 attagctgatatcgtgagtcagtaatgcaggctattgagaaaagtagctacagctttcaa 236
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 448 attagctgatatcgtgagtcagtaatgcaggccattgagaaaagtagctacagctttcaa 389
Query: 237 ttcactagtgtaagacacttctgttagatatgaacattgttaacaaatgcaggctagagc 296
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 388 ttcactagtgtaagacacttctgttagatatgaacactgttaacaaatgcaggctagagc 329
Query: 297 tgggcagcaggattgtgaaacaaatttagttcaatggatattaactgtatattttaatag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgggcagcaggattgtgaaacaaatttagttcaatggatattaactgtatattttaatag 269
Query: 357 tacagaatttagagtttatatatacacatatgtggtagtattaccagctcatttgaaagt 416
||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 268 tactgaatttagagtttatatatacacatatgtggtaatattaccagcttatttgaaagt 209
Query: 417 tgtgtgtgagctgggcagtggtggtgcacacatttaatcctagaacttgggaggcagaga 476
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 208 tgtgtgtgagctgggcagtggtggtgcacacatttaatcctagcacttgggaggcagagt 149
Query: 477 caggtggatttctgagttgaggccagcctggtctacagagtgagttccaggacaaccagg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 caggtggatttctgagttgaggccagcctggtctacagagtgagttccaggacaaccagg 89
Query: 537 gctacacagagaaaccctgtcttgaaaaaccaaaaa 572
||||||||||||||||||||||||||||| |||||
Sbjct: 88 gctacacagagaaaccctgtcttgaaaaa--aaaaa 55
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1031
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1021
Effective search space: 629957
Effective search space used: 629957
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_e03.g1 MSMg01no141_e03.g1 CHROMAT_FILE:
MSMg01no141_e03.g1 PHD_FILE: MSMg01no141_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:27 2005
(193 letters)
>mm_chr6_55485551_55486143
Length = 593
Score = 292 bits (151), Expect = 9e-84
Identities = 169/175 (96%)
Strand = Plus / Plus
Query: 1 agaaggctttctgtcttggctggaacagtacgtttgcttacatgacttcccccatagccc 60
|||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||||
Sbjct: 201 agaaggctttctgtcttggctggaacagtaggcttacttacatgacttctcccatagccc 260
Query: 61 agaatttgagttggagctgcagtaagtctgcagtgtaggcttttcgtatgtccccaagac 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaatttgagttggagctgcaataagtctgcagtgtaggcttttcgtatgtccccaagat 320
Query: 121 tccttaggacttgttacaaatccacagctgtgtgtgtgtgtgtgtgtgtgtgtgt 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttaggacttgttacaaatccacagctgtgtgtgtgtgtgtgtgtgtgtgtgt 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
