Query= MSMg01no141_m09.b1 MSMg01no141_m09.b1 CHROMAT_FILE:
MSMg01no141_m09.b1 PHD_FILE: MSMg01no141_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:34 2005
(618 letters)
>mm_chr6_140626171_140627189
Length = 1019
Score = 1166 bits (603), Expect = 0.0
Identities = 615/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 1 acctttcctcaacggacagacagacaaagccccgttgactaggagagccagcccaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 acctttcctcaacggacagacagacaaagccccgttgactaggagagccagtctaaggca 260
Query: 61 tggctttaaccggtttcgcagcaagaatgatatggaggcatctggaagattgacaccccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctttaaccggtttcgcagcaagaatgatatggaggcatctggaagattgacaccccc 320
Query: 121 cccccc-gcctcccgacagaggaacagaaaaggctaagagggagctataatctgtgagag 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccccccgcctcccgacagaggaacagaaaaggctaagagggagctataatctgtgagag 380
Query: 180 gctgctgccaaggaaaatatctgaaacccaaataaaaagaaaaatcccaaaccgagagat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgctgccaaggaaaatatctgaaacccaaataaaaagaaaaatcccaaaccgagagat 440
Query: 240 gggttgcacaccaaagggtcgagcagcagtggaccggaaacttccttccacaccaaattc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttgcacaccaaagggtcgagcagcagtggaccggaaacttccttccacaccaaattc 500
Query: 300 ctgtgatccttgcgctgttcatcttggggtggaaggagcagcgagccaaatgcttggagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgatccttgcgctgttcatcttggggtggaaggagcagcgagccaaatgcttggagg 560
Query: 360 agttgggttgaaatttaactggcgaacacagaaaggcttctctctcagaaaaagttacag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttgggttgaaatttaactggcgaacacagaaaggcttctctctcagaaaaagttacag 620
Query: 420 aacaaaataatgattgtgtagtagtagatcttgtgcttagagaccataggccccctggcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaaaataatgattgtgtagtagtagatcttgtgcttagagaccataggccccctggcc 680
Query: 480 aaatgcatttctagcagccttgcgtgtaaggagagagaatggccagcctggactacgtgg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 aaatgcatttctagcagccttgcgtgtaaggagagagaatggccagcctggactacatgg 740
Query: 540 taagatttttatcagaaaaaaaaaaagaagtagaaaatgggaatctaagcaatgaaatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taagatttttatcagaaaaaaaaaaagaagtagaaaatgggaatctaagcaatgaaatta 800
Query: 600 aattgttccaacggaaaag 618
|||||||||||||||||||
Sbjct: 801 aattgttccaacggaaaag 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1019
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1009
Effective search space: 613472
Effective search space used: 613472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_m09.g1 MSMg01no141_m09.g1 CHROMAT_FILE:
MSMg01no141_m09.g1 PHD_FILE: MSMg01no141_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:34 2005
(673 letters)
>mm_chr6_140749285_140750357
Length = 1073
Score = 1241 bits (642), Expect = 0.0
Identities = 665/673 (98%)
Strand = Plus / Minus
Query: 1 aaatgcctctgggaacacgagtaagtctccccttaaataagtgggtggttcccattcact 60
|||||||||||||||||||||||||||||| | |||||||||||||||| |||||||
Sbjct: 921 aaatgcctctgggaacacgagtaagtctccacagaaataagtgggtggtttttattcact 862
Query: 61 gggaaatgaacgaagcaaggatgtactgattagaaatgtgcttgctagcatcagataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gggaaatgaacgaagcaaggatgtactgattagaaatgtgcttgctagcatcagataaat 802
Query: 121 tgcggtttggggacatctgtgaagaactacaagtttgcttatagcaatctattgcctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgcggtttggggacatctgtgaagaactacaagtttgcttatagcaatctattgcctatg 742
Query: 181 accataacaaaatacctgaggctggtaacataaagaaaggagagttatttagcccacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accataacaaaatacctgaggctggtaacataaagaaaggagagttatttagcccacagt 682
Query: 241 taaatggaggttcaagaacatggctggtgtcaactatgctctggtcggatgctcataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaatggaggttcaagaacatggctggtgtcaactatgctctggtcggatgctcataaaa 622
Query: 301 gatggcattcacagtgaaagtgtttgtgacagagaccacaagttgagtcagtgagtcaga 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 gatggcattcacagtgaaagtgttggtgacagagaccacaagttgagtcagtgagtcaga 562
Query: 361 gtgaggggaagaggtaatattgcttttcttgtaacaactaccacaatccctttcaaaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaggggaagaggtaatattgcttttcttgtaacaactaccacaatccctttcaaaggc 502
Query: 421 tgaattcactcctcataccagactccccctatttacatatttcatttagacagggtctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaattcactcctcataccagactccccctatttacatatttcatttagacagggtctca 442
Query: 481 ctatctgctctggctctcttggaactcactatgtagatcaggctgctctcagcccagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatctgctctggctctcttggaactcactatgtagatcaggctgctctcagcccagaga 382
Query: 541 tctgcctgcctctgtctcctgggtactgggattaaagacatgggattaaacccatgctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgcctgcctctgtctcctgggtactgggattaaagacatgggattaaacccatgctgg 322
Query: 601 atatcagactccacctcttanagaacctgccacatcttaacattgtcagactggggtcca 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatcagactccacctcttaaagaacctgccacatcttaacattgtcagactggggtcca 262
Query: 661 gactcccagtgca 673
|||||||||||||
Sbjct: 261 gactcccagtgca 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
