Query= MSMg01no141_p08.b1 MSMg01no141_p08.b1 CHROMAT_FILE:
MSMg01no141_p08.b1 PHD_FILE: MSMg01no141_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:59 2005
(685 letters)
>mm_chr6_120332647_120333731
Length = 1085
Score = 1079 bits (558), Expect = 0.0
Identities = 571/576 (99%), Gaps = 2/576 (0%)
Strand = Plus / Minus
Query: 1 tatcatttaaaccataaattttgtactttcaaagattgaaagcttgctatacctgattaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 574 tatcatttaaaccataaattttgtactttcaaagattgaaagcttgctatacatgattaa 515
Query: 61 aacattcttcattaggctaaaccacaaagaattcccagcatagagtgaaattcaaacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aacattcttcattaggctaaaccacaaagaattcccagcatagagtgaaattcaaacatc 455
Query: 121 acttgagccttgtaacaaccatgtcattacacttcattttataagaataacagattttac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acttgagccttgtaacaaccttgtcattacacttcattttataagaataacagattttac 395
Query: 181 cttctttatcttttgctcctactgccaggcccacaactttgggtccagccccaaagatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 394 cttctttatcttttgctcctactgccaggcccacaactttgggtccagccccaaaaatct 335
Query: 241 gaagtttcttcagttctgtgtttctatttacttctccagagtctgactaaaaataaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaagtttcttcagttctgtgtttctatttacttctccagagtctgactaaaaataaataa 275
Query: 301 ataaatagatagatagataaataaataaatagaattaatattagcataatattaattact 360
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ataaatagat--atagataaataaataaatagaattaatattagcataatattaattact 217
Query: 361 cgggatcatacaattaagaggtagggtcttagtgagcagtggtaatcccagtacttgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cgggatcatacaattaagaggtagggtcttagtgagcagtggtaatcccagtacttgaga 157
Query: 421 ggcacaggaaagcagatctcttagtttgagaccagtctggtctattgtgggcctaggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggcacaggaaagcagatctcttagtttgagaccagtctggtctattgtgggcctaggtac 97
Query: 481 cagaagttttccatggagacctttatccaggcctggtgggaaggccccagcgaaggaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 cagaagttttccatggagacctttatccaggcctggtgggaaggccccagcgaaggaagt 37
Query: 541 gagtgcaggcagggagtagaagcctctgccatgcct 576
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gagtgcaggcagggagtagaagcctctgccatgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_p08.g1 MSMg01no141_p08.g1 CHROMAT_FILE:
MSMg01no141_p08.g1 PHD_FILE: MSMg01no141_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:59 2005
(668 letters)
>mm_chr6_120181215_120182282
Length = 1068
Score = 1199 bits (620), Expect = 0.0
Identities = 656/668 (98%)
Strand = Plus / Plus
Query: 1 taaccagaagtacacatacaccccttcagaacacaaacacacacccacacacacacacac 60
||||||||||||||||||||| | ||||| ||| |||||||| |||||||||||||||
Sbjct: 201 taaccagaagtacacatacacgcaggcagaatacacacacacacacacacacacacacac 260
Query: 61 acacacacacacacacacaccctatacacagagaccaggttcaatagagacctttacctc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 acacacacacacacacacaccctatacacagagaccaggttctatagagacctttacctc 320
Query: 121 tgagagccaggggacaggcttgttccacttcaggtagctactgttcctactcctacttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagagccaggggacaggcttgttccacttcaggtagctactgttcctactcctacttcg 380
Query: 181 ggcaatttcttggtcctatcagcaaaacagagaaggagcttggtgaaacgattaataaga 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 ggcaatttcttggtcctatcagcaaaacagagaaggagcttggtgaaaagattaataaga 440
Query: 241 aattggagacagaacaggattctgggctccttgaagctgcctgtggagaaggaaggggtc 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aattggagacagaacaggattctgggctccttgaagctgactgtggagaaggaaggggtc 500
Query: 301 atgggacatagttcctgcttcaaggaagcttgtcagcttaagggacacagtctcattcat 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgggacatagttcctgcctcaaggaagcttgtcagcttaagggacacagtctcattcat 560
Query: 361 tatttacaccacatccctgaggagagtatgtcaggcttgtcaacatgcactccgctttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttacaccacatccctgaggagagtatgtcaggcttgtcaacatgcactccgctttct 620
Query: 421 gttcacttccctgaagttttcaaccatgagaaaaagtggactctggatgcccttggagca 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtcacttccctgaagttttcaaccatgagaaaaagtggactctggatgcccttggagca 680
Query: 481 ggagctgtgatttcttattccttcagcccccacccccaagttctatccagacttgtcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggagctgtgatttcttattccttcagcccccacccccaagttctatccagacttgtcact 740
Query: 541 ggtctcaacaaatgggagcccctcaaagacaccccagaccctccctaccacatgggtcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtctcaacaaatgggagcccctcaaagacaccccagaccctccctaccacatgggtcta 800
Query: 601 cagagttactttggtctcatctggctttggggatccatgtctgctctatggtcaatggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cagagttactttggtctcatctggctttggggatccatgtctgctctatggtcaatggtt 860
Query: 661 gcaggggt 668
||||||||
Sbjct: 861 gcaggggt 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
