Query= MSMg01no142_d16.b1 MSMg01no142_d16.b1 CHROMAT_FILE:
MSMg01no142_d16.b1 PHD_FILE: MSMg01no142_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:38 2005
(706 letters)
>mm_chr6_82913423_82914528
Length = 1106
Score = 1334 bits (690), Expect = 0.0
Identities = 702/706 (99%)
Strand = Plus / Plus
Query: 1 gccattgtgacatgaatataaataattctcatccaaatgattaatttccccctcaaagga 60
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 201 gccattgtgacatgaatataaataattctaacccaaatgattaatttccccctcaaagga 260
Query: 61 ggattccagaagaatgtccttcctgtgacactcttcctaattctttaaaatttttcatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattccagaagaatgtccttcctgtgacactcttcctaattctttaaaatttttcatta 320
Query: 121 taaagaatttattgaaattaatctacattgaggtgttagggttcacctaactttggttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagaatttattgaaattaatctacattgaggtgttagggttcacctaactttggttta 380
Query: 181 cctatagtgttatttcctcatccttagtagctgatattcaaaaggaatcatgtcaaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctatagtgttatttcctcatccttagtagctgatattcaaaaggaatcatgtcaaagca 440
Query: 241 acaaataacagagataaaggtgagttctaagaaagatgctgtggtagactataactgagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaataacagagataaaggtgagttctaagaaagatgctgtggtagactataactgagt 500
Query: 301 gcaatgggagagggagaataagacaaagaaatagagtaattctgtcatgtggcaaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaatgggagagggagaataagacaaagaaatagagtaattctgtcatgtggcaaatcaa 560
Query: 361 atacttctaaagtttaaaggaatcgcataaacatagagttatgaaaataaaaacccaaac 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 atacttctaaagtttaaaggaatcgcataaacatagagttatgaagataaaaacccaaac 620
Query: 421 aggctcacatattcctagttgtgacaataaaagcatacagaaaaagggcaaataaaaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggctcacatattcctagttgtgacaataaaagcatacagaaaaagggcaaataaaaatg 680
Query: 481 cacaatatagtgatttttctttcccaaaagttgtaaaacagaaagtgctggggctggaga 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 cacaatatagtgatttttctttcccaaaagttgtaaaacagaaagtactggggctggaga 740
Query: 541 gatggctcacaagttaagagtatgtactgctctttgagagaacctgaattcagtgaccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatggctcacaagttaagagtatgtactgctctttgagagaacctgaattcagtgaccag 800
Query: 601 catccatattagacaactcacaactgcctgtaacttcagttcagggaatctacgggcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catccatattagacaactcacaactgcctgtaacttcagttcagggaatctacgggcact 860
Query: 661 tacagtcacgagtatataaccacagacacctacacacgtacatact 706
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tacagtcacgagtatataaccacagacacctacacacgtacatact 906
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no142_d16.g1 MSMg01no142_d16.g1 CHROMAT_FILE:
MSMg01no142_d16.g1 PHD_FILE: MSMg01no142_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:38 2005
(269 letters)
>mm_chr6_83017607_83018278
Length = 672
Score = 487 bits (252), Expect = e-142
Identities = 267/272 (98%), Gaps = 3/272 (1%)
Strand = Plus / Minus
Query: 1 ccaaagaagaccttaagactggagatgtgtaggccaggaaggggaaactgggggcaagat 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ccaaagatgaccttaagactggagatgtgtaggccaggaaggggaaactgggggcaagat 413
Query: 61 taacagtaggcaaaactaatgttagatttagagagagag-aaaaaatgctaatgcctgcc 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 412 taacagtaggcaaaactaatgttagatttagagagagagaaaaaaatgctaatgcctgcc 353
Query: 120 tttggggg-atctccatgacatcaca-ggggtggagacagatgaaattttgggtctaaga 177
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 352 tttgggggaatctccatgacatcacagggggtggagacagatgaaattttgggtctaaga 293
Query: 178 tctcctggtaaaggcgggcaggcacagggaactctggggagttacatggattgagccttt 237
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tctcctggtaaaggcgggaaggcacagggaactctggggagttacatggattgagccttt 233
Query: 238 ctttccacagtattctacaaacacatttatga 269
||||||||||||||||||||||||||||||||
Sbjct: 232 ctttccacagtattctacaaacacatttatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 672
Length adjustment: 9
Effective length of query: 260
Effective length of database: 663
Effective search space: 172380
Effective search space used: 172380
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
