TCCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCAGTTATCATCTCCTGGGCACCTGGACTACAGGCACAATCCAC
TGTGCCTGGTATTTTACATAGGTGCTGAGAATTCAGGTTCTTCTTTTATA
TACAACAATCACTTTACCAACTAAGCCATCTCAGCTCCATCCAGAGCTTT
GTATAATGTGTTTTCTCATTTAATTCCCACACAAACCAACAGGGAGGCAT
TGCTGTTGCTATTTCTGTTTTACAGTTATGATCGCTGCATGCCTATCAGT
AATCATTGCACGCCGGCATATAATACAGTGCTCTGAAGCATCGGTAAAAA
TTTCTGAGAGATATGTTCATTGTATTAAGTGGCGTTTCTCACAGCAATGA
TGTCAGAACATGAAATACTATTCATTACCTTTTAATGTGCATGTATCTGG
CATCGCAGGGCAGGAAGGCATTCAATTTTATATGGCAGACCCCTGTGGTT
TTTCTCTGAATTCAATTTTTGAGCACATGGGTCCTATTCTCAAACCTCTG
CAACCCTGGGGTTTCCCATATTGAGAGAGTTCTGATTTTCCACTACTCTG
AGTCTTTTGTTAGAAAGAGAAGATGAAAGTGTGGGTAAGTCCCTATTGCT
GGGCTTCTGTGATTTGTGCATGAGGATTGCTGATCCCTTCCCCTCCTTTT
CTCCAGTGTCATCCG

NNNNTTTTTATTNNNTTNTNNTTTTTCTTTTTTTTTTTATTTATATATTT
TTAANACAAGATAAGGGTAGCCTGGCGGCCGCCGATCCCGAACTTAGGCG
ACCTAAAGAAGGACCGCGGAATCTCGGGGCAACGGGGAGTAGGGCGAGCC
AGCGGAGCCGTGGGGGGTACGTTCTCTACTCCCATAGCAAATGACGGGTT
AATAGCAGGGGGGACAAATATAACTATAAGGCAAGCATTATTCCCCATTT
GACCCCCCCGGTTTCCCCCCCTTCCCTCGGATGGTACTCGGAGGCCGGAA
TTCTATACGTTAAATATGCTGAAGGCGGGGATTCAGCCTGCTTTGTATCC
CACAGTATCGGCACACAACTGCTCAGCGCGCGTGCCCGCTTCACAGGCCG
GGCAGTTGGCGCTTGCGCTCTCGCAGGGGGGGTACCTGGAGGTGGTCCAA
GACCCTATTATGCGTGTTTCACCTGCCTGCGCGCCTAAGGTGACCGTGCA
TTTTACATATAAATCCCTCTGACTGCCGTAGTTATTTCGTCGATAGTGTG
AGTAGCATGGCGGCGTTTATATGCTACCCCGCGTACGCGCGCGGGATAAT
AACGAGCGAGAAGAAGAAGACGTAAGCGCGAGTCTAGCGATGCGCGCGGC
GAGTCATCGTTATTGCCGCGGTGAACGAGCCATGCGGGTAGCCGGAATCA
GTAACAAACTATTATCTACGGAAAGTGACGGTGGCTAAATGTAATATAAA
AACAACAGGAAATATACACGAGATATGAGGCGCCGGCTAATGTATACATG
ATTGCCACAGTCAGAGGAAAGGCCGCGGCAATGATGTCGAAAAAATAACA
TGCTCAAAAACCACGACACAGAAATCCGACGTCGCTTCAAACGGTGTTCT
CCTAACCAGATTAAAATCATATTTGAACTATTTAN

Query= MSMg01no143_f05.b1 MSMg01no143_f05.b1 CHROMAT_FILE:
MSMg01no143_f05.b1 PHD_FILE: MSMg01no143_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:51 2005
         (662 letters)



>mm_chr6_110705453_110706514
          Length = 1062

 Score = 1259 bits (651), Expect = 0.0
 Identities = 657/659 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctccagttatcatctcctgggcacctggactacaggcacaatccactgtgcctg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 ggaattctccagttatcatctcctgggcacctggactacaggcacaatctactgtgcctg 263

                                                                       
Query: 64  gtattttacataggtgctgagaattcaggttcttcttttatatacaacaatcactttacc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtattttacataggtgctgagaattcaggttcttcttttatatacaacaatcactttacc 323

                                                                       
Query: 124 aactaagccatctcagctccatccagagctttgtataatgtgttttctcatttaattccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aactaagccatctcagctccatccagagctttgtataatgtgttttctcatttaattccc 383

                                                                       
Query: 184 acacaaaccaacagggaggcattgctgttgctatttctgttttacagttatgatcgctgc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acacaaaccaacagggaggcattgctgttgctatttctgttttacagttatgatcgctgc 443

                                                                       
Query: 244 atgcctatcagtaatcattgcacgccggcatataatacagtgctctgaagcatcggtaaa 303
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgcctatcaataatcattgcacgccggcatataatacagtgctctgaagcatcggtaaa 503

                                                                       
Query: 304 aatttctgagagatatgttcattgtattaagtggcgtttctcacagcaatgatgtcagaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatttctgagagatatgttcattgtattaagtggcgtttctcacagcaatgatgtcagaa 563

                                                                       
Query: 364 catgaaatactattcattaccttttaatgtgcatgtatctggcatcgcagggcaggaagg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgaaatactattcattaccttttaatgtgcatgtatctggcatcgcagggcaggaagg 623

                                                                       
Query: 424 cattcaattttatatggcagacccctgtggtttttctctgaattcaatttttgagcacat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cattcaattttatatggcagacccctgtggtttttctctgaattcaatttttgagcacat 683

                                                                       
Query: 484 gggtcctattctcaaacctctgcaaccctggggtttcccatattgagagagttctgattt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gggtcctattctcaaacctctgcaaccctggggtttcccatattgagagagttctgattt 743

                                                                       
Query: 544 tccactactctgagtcttttgttagaaagagaagatgaaagtgtgggtaagtccctattg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tccactactctgagtcttttgttagaaagagaagatgaaagtgtgggtaagtccctattg 803

                                                                      
Query: 604 ctgggcttctgtgatttgtgcatgaggattgctgatcccttcccctccttttctccagt 662
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctgggcttctgtgatttgtgcatgaggattgctgatcccttcccctccttttctccagt 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)