Query= MSMg01no144_a15.b1 MSMg01no144_a15.b1 CHROMAT_FILE:
MSMg01no144_a15.b1 PHD_FILE: MSMg01no144_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:45 2005
(374 letters)
>mm_chr6_28535258_28536030
Length = 773
Score = 688 bits (356), Expect = 0.0
Identities = 365/368 (99%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 5 ggaattcttgctccggccgtatggctggttggaaagggggaagaagagaggaccaggagt 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttgctccgggtgtatggctggttggaaagggggaagaagagaggaccaggagt 264
Query: 65 ctttgcttaccgtatgagaactggtgccctttatcagcagcattttccaaatgatgagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttgcttaccgtatgagaactggtgccctttatcagcagcattttccaaatgatgagca 324
Query: 125 cattgagcattctgtcagccccatggaaagctgaaaagtggctgtggattgtttagtcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattgagcattctgtcagccccatggaaagctgaaaagtggctgtggattgtttagtcag 384
Query: 185 tgctgttgcttaaaaaactaaaccaggtatctgtcactgtcctgtcattctactcatttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctgttgcttaaaaaactaaaccaggtatctgtcactgtcctgtcattctactcatttt 444
Query: 245 ggttgcctacagttaaaacccataaaaatactacctgaagctaaactgggatgtgctcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttgcctacagttaaaacccataaaaatactacctgaagctaaactgggatgtgctcca 504
Query: 305 atttcacatagatgtagagaatgtttaaaaaaaaaaattctgaaatcttagtctgctcct 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 atttcacatagatgtagagaatgtttaaaaaaaaaa-ttctgaaatcttagtctgctcct 563
Query: 365 tcgtcaga 372
||||||||
Sbjct: 564 tcgtcaga 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 773
Length adjustment: 9
Effective length of query: 365
Effective length of database: 764
Effective search space: 278860
Effective search space used: 278860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_a15.g1 MSMg01no144_a15.g1 CHROMAT_FILE:
MSMg01no144_a15.g1 PHD_FILE: MSMg01no144_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:45 2005
(336 letters)
>mm_chr6_28706645_28707380
Length = 736
Score = 603 bits (312), Expect = e-177
Identities = 330/336 (98%)
Strand = Plus / Minus
Query: 1 acttcagactctatcaggtgaaggtcatttctcatctctcatgaggttcaattctttgcc 60
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 536 acttcagattctatcaggtgaaggtcatttctcatctctcttgaggttcaattctttgcc 477
Query: 61 cttagcatttgtgttagggcccaagaaattcctgcctccagaatcagatcaggggatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttagcatttgtgttagggcccaagaaattcctgcctccagaatcagatcaggggatcaa 417
Query: 121 agagctattcttaatgtctcagttgaggccaactgaaggagggaatggaggtagaggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 416 agagctattcttaatgtctcagttgaggccaactgaaggagggaatggaggcagaggcag 357
Query: 181 gctactcactccagcatttagcggtcctcctccacaacggggccattgagtgggtgccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gctactcactccagcatttagcggtcctcctccacaacggggccattgagtgggtgccac 297
Query: 241 aatagatggctgagaataaaaggctgaaggaaagcatacagagtccccttgcacagagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aatagatggctgagaataaaaggctgaaggaaagcatacagagtccccttgcacagagtc 237
Query: 301 ggccattcatcaccaggctagtgccattatctggga 336
|| ||||||||||||||| ||||||| |||||||||
Sbjct: 236 ggtcattcatcaccaggcaagtgccaatatctggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
