Query= MSMg01no144_a16.b1 MSMg01no144_a16.b1 CHROMAT_FILE:
MSMg01no144_a16.b1 PHD_FILE: MSMg01no144_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:45 2005
(469 letters)
>mm_chr6_22298603_22299471
Length = 869
Score = 795 bits (411), Expect = 0.0
Identities = 450/469 (95%), Gaps = 11/469 (2%)
Strand = Plus / Minus
Query: 5 gaattccaggccagcccggtctacttagtgagtttcgagccagccagggctacgtaataa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattccaggccagcctggtctacttagtgagtttcgagccagccagggctacgtaataa 483
Query: 65 gaccctatctcaacaagaacaacaacaaatccaaaagctgccatgtagttaccctccatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaccctatctcaacaagaacaacaacaaatccaaaagctgccatgtagttaccctccatc 423
Query: 125 tttgttccatctagctggggatgtacagctggagtagggactgtgggacctgatgtcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttgttccatctagctggggatgtacagctggagtagggactgtgggacctgatgtcaaa 363
Query: 185 gcactttttatacagaagttttctggacttttgctggcaggagtcacatgcatagagctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcactttttatacagaagttttctggacttttgctggcaggagtcacatgcatagagctg 303
Query: 245 tatgatattgcaactttttttttcttttggaacattatctctttatttagcttgaacagc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tatgatattgcaactttttttttcttttggaacattatctctttatttagcttgaacagt 243
Query: 305 tctagctgtcctggaactcactgcgtagaccaggctagccttcaactcacagcgatctgc 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctagctgtcctggaactcactgtgtagaccaggctagccttcaactcacagcgatctgc 183
Query: 365 tttccca-----ccccccggagccactgtacctgctgtttgaatcttgtttccagcagtg 419
||||||| ||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 182 tttcccagtgtt------ggacccactgtacctgctgtttgaatcttgtttccagtagtg 129
Query: 420 cactgttgtatgtagatttagcacagcagcttaccccagtgactctttc 468
|||| |||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 128 cacttttgtatgtagatttagcagagtagcttaccccagtgactctttc 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_a16.g1 MSMg01no144_a16.g1 CHROMAT_FILE:
MSMg01no144_a16.g1 PHD_FILE: MSMg01no144_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:45 2005
(340 letters)
>mm_chr6_22205079_22205818
Length = 740
Score = 658 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1 aaaagagcaataggaagcaatgttacattcaactctgagttcctgtgtgttccacaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagagcaataggaagcaatgttacattcaactctgagttcctgtgtgttccacaaaga 260
Query: 61 tccccccacccctagctgcctgtgagcttagatggggagcacagtctaaatggatggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccccccacccctagctgcctgtgagcttagatggggagcacagtctaaatggatggtat 320
Query: 121 gcataattgtaaagtgtgggacaaagtgaagttccctgtctgtcactttgtatatttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcataattgtaaagtgtgggacaaagtgaagttccctgtctgtcactttgtatatttgtg 380
Query: 181 gatgctgttactaaggtagctttcgcttgtccctataggcctgtttaatttaagacaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgctgttactaaggtagctttcgcttgtccctataggcctgtttaatttaagacaaca 440
Query: 241 gttacatttcagatattgtgcaaagaactgcagaattctcaaatgtaaaagcatgaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttacatttcagatattgtgcaaagaactgcagaattctcaaatgtaaaagcatgaagca 500
Query: 301 ttactatgtgactagtacccgtattcttctgtgaacaaat 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttactatgtgactagtacccgtattcttctgtgaacaaat 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
