CAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAATCCGC
GGAATTCAGATTATTTTCTCTTCTTCACTAGATTGGAAGCTCCAAAGGGC
TTAGCAGCACAATAATAATTTTGTATGCCTACATAGCCTGATAGCCTAGT
ACAGCTCCTGACACAACAGGGACTGAATATACTTATGGAGTGGATCACTT
TAAGCTTTTTTGAGTGAGTGGATCAATTGCAGATTATAGAAGATGGTACT
CCACTTAAAGAGTTTAAAAAGACTAGTCTTACTGGGCAAGGTGGTGCACA
CCTCACTCTCAGAACTCCTGAGACAGAGAAACAGGAGCCTTGCTACAAGT
TTAAAGTCAGCAAGGGCTATATAGAGGGCTCTTGCCTCAAAACAAAAGGG
AGGAAAAAAGAAGGAGGACGAACAGGAGGAAAGAAGGAAGGAAGGAAGGA
AGGAAGGCAGGCAGCCCCAAAACCCCCCCCCACCCCACCCAACCCCCTAC
CACCATCCCACCACCACCCACCCTTCTTTCCTCCTTTCCTCCCTCTTTCC
CCTTCTCTTTTTCGTTTCTTTGCTCTTTTTCCTCTTTCCCTATCTTCCTT
TTTCTCTATCCTTTTCCTTTCCTTTTTCTTTTCGCTTCACCCTTTCTCTC
TCCCTCCTCTCTTTTCCCCCTCCTCCTCTCTCTTCCTCTCTCTCCTTCTT
TCCTCCGTCTCTCTTCCCTTCCTTTTTCTCTCCTC

NCCAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTTCAATTCAGTAAATTTTTGTAA
AGGGGTACATGAAAATGCCAGAAGCGGATATATAACCTTAGCTTAAAACA
AAATTCCAAGTATTTATACAAATGTTACATTCAAAGTAGAAAAATATGTA
AATCACTCTTTGATGTACATAATATACTTGGTTTAAATAAAAACAAAGGA
ATAAAAAGTACAAATTGCAGTTTCATGTTAAAAACTGAAATTTGGTTCCA
TAATCATATCACTTTGGATTGTAAATATTTTCCTAGGCCCAAACCTTAGT
AACTTAAAACCTTTATTACCTGACAGCCTTCAGGCCAATTGTCAGGGGTG
AGTTAGCTGTGTCTCTGAATCTTTTCTTTTTTTTATTTTATCATTTCCAA
ATTTTTTTAATTAGGTATTTTCTTCATTTACATTTCCAATGCTATCCCAA
AAGTCCCTCAAACCCCCCCACACACACTCCCCTACCCACCCACTCCCACT
TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACC
AAGGGGTCTCTCTTCCCAATGATGGCCGACTAGGCCATCTTTTGCTACAT
ATGCAGCTAGAGACACGAAATTTTTTAGGTTATAACCAAAGACTCAGCAG
GTGGGAGGGCTCATCTG

Query= MSMg01no144_j15.g1 MSMg01no144_j15.g1 CHROMAT_FILE:
MSMg01no144_j15.g1 PHD_FILE: MSMg01no144_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:28 2005
         (625 letters)



>mm_chr6_93448012_93449036
          Length = 1025

 Score = 1195 bits (618), Expect = 0.0
 Identities = 624/626 (99%), Gaps = 1/626 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttcaattcagtaaatttttgtaaaggggtacatgaaaatgccagaagcggatatataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcaattcagtaaatttttgtaaaggggtacatgaaaatgccagaagcggatatataa 260

                                                                       
Query: 61  ccttagcttaaaacaaaattccaagtatttatacaaatgttacattcaaagtagaaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttagcttaaaacaaaattccaagtatttatacaaatgttacattcaaagtagaaaaat 320

                                                                       
Query: 121 atgtaaatcactctttgatgtacataatatacttggtttaaataaaaacaaaggaataaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtaaatcactctttgatgtacataatatacttggtttaaataaaaacaaaggaataaa 380

                                                                       
Query: 181 aagtacaaattgcagtttcatgttaaaaactgaaatttggttccataatcatatcacttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtacaaattgcagtttcatgttaaaaactgaaatttggttccataatcatatcacttt 440

                                                                       
Query: 241 ggattgtaaatattttcctaggcccaaaccttagtaacttaaaacctttattacctgaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggattgtaaatattttcctaggcccaaaccttagtaacttaaaacctttattacctgaca 500

                                                                       
Query: 301 gccttcaggccaattgtcaggggtgagttagctgtgtctctgaatcttttctttttttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccttcaggccaattgtcaggggtgagttagctgtgtctctgaatcttttctttttttta 560

                                                                       
Query: 361 ttttatcatttccaaatttttttaattaggtattttcttcatttacatttccaatgctat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttatcatttccaaatttttttaattaggtattttcttcatttacatttccaatgctat 620

                                                                       
Query: 421 cccaaaagtccctcaaacccccc-cacacacactcccctacccacccactcccacttctt 479
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccaaaagtccctcaaaccccccacacacacactcccctacccacccactcccacttctt 680

                                                                       
Query: 480 ggccctggcgttcccctgtactgaggcatataaagtttgcaagaccaaggggtctctctt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggccctggcgttcccctgtactgaggcatataaagtttgcaagaccaaggggtctctctt 740

                                                                       
Query: 540 cccaatgatggccgactaggccatcttttgctacatatgcagctagagacacgaaatttt 599
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccaatgatggtcgactaggccatcttttgctacatatgcagctagagacacgaaatttt 800

                                     
Query: 600 ttaggttataaccaaagactcagcag 625
           ||||||||||||||||||||||||||
Sbjct: 801 ttaggttataaccaaagactcagcag 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)