Query= MSMg01no144_o07.b1 MSMg01no144_o07.b1 CHROMAT_FILE:
MSMg01no144_o07.b1 PHD_FILE: MSMg01no144_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:50 2005
(268 letters)
>mm_chr6_71662573_71663240
Length = 668
Score = 468 bits (242), Expect = e-136
Identities = 259/266 (97%), Gaps = 4/266 (1%)
Strand = Plus / Plus
Query: 5 gaattctcaaacata--ccactgcctttctttgctcttaaaatctggaatgcagaaaaat 62
||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaacagaaacc--tgcctttctttgctcttaaaatctggaatgcagaaaaat 262
Query: 63 aacccagctaatagagggttcaggttcattggggatatatttcctggtgcagctctgtgg 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 263 aacccagctaatagagggttcaggttcattggggatatatttcctggtacagctctgtgg 322
Query: 123 gacattatagaaactggatgaatgctttagtcacattgggagaggaaaggtgctgacttg 182
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacattgtagaaactggatgaatgctttagtcacattgggagaggaaaggtgctgacttg 382
Query: 183 gaagacagcctatgggttctagactccacaattatccttcccagtgctagagtccagagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaagacagcctatgggttctagactccacaattatccttcccagtgctagagtccagagt 442
Query: 243 tggtggggaggcacttcctatctgag 268
||||||||||||||||||||||||||
Sbjct: 443 tggtggggaggcacttcctatctgag 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no144_o07.g1 MSMg01no144_o07.g1 CHROMAT_FILE:
MSMg01no144_o07.g1 PHD_FILE: MSMg01no144_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:50 2005
(189 letters)
>mm_chr6_71776471_71777059
Length = 589
Score = 354 bits (183), Expect = e-102
Identities = 186/187 (99%)
Strand = Plus / Minus
Query: 1 ttgtggtgagtgagatgagaagcagacaagagcctgaaagttcttggaccagataggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttgtggtgagtgagatgagaagcagacaagagcctgaaagttcttggaccagataggctc 292
Query: 61 aaatatgtagcacagcaacagaaacatcaagtgaccctgcatcaacagagtaaggggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aaatatgtagcacagcaacagaaacatcaagtgaccctgcatcaacagagtaaggggaat 232
Query: 121 ggaatcccagaattagtcccatgcatgcatatgtgtgtgtgtgtgtgtgtgtgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggaatcccagaattagtcccatgcatgcatatgtgtgtgtgtgtgtgtgtgtgtgtgtgt 172
Query: 181 atgtatg 187
||||||
Sbjct: 171 gtgtatg 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
