Query= MSMg01no145_b02.b1 MSMg01no145_b02.b1 CHROMAT_FILE:
MSMg01no145_b02.b1 PHD_FILE: MSMg01no145_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:03 2005
(313 letters)
>mm_chr6_50120992_50121704
Length = 713
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 6 gaattctctcttccacctctcatgttatccattcctatgcagacatcataatatgtaaac 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaattctctcttccacctatcatgttatccattcctatgcagacatcataatatgtaaac 256
Query: 66 ctgcacattaataattttgatggttatggtcaggatgtattgtatgagagaaaaataagt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgcacattaataattttgatggttatggtcaggatgtattgtatgagagaaaaataagt 196
Query: 126 aaaaaattaaaaaaaaaattgtgatctcacccttcaattcaatgaaatctagaatcacct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaaaaattaaaaaaaaaattgtgatctcacccttcaattcaatgaaatctagaatcacct 136
Query: 186 aggagataggcccctggtcttgcaattgggggggggggggcgggtatcctgactagctta 245
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 135 aggagataggcccctggtcttgcaatt-ggggggggggggcgggtatcctgactagctta 77
Query: 246 actgaggtatgaacagtcacctactgtgggtggcaccattttctgggctggagtcctgga 305
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 actgaggtgtgaacagccacctactgtgggtggcaccattttctgggctggagtcctgga 17
Query: 306 ttgtaaaa 313
||||||||
Sbjct: 16 ttgtaaaa 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_b02.g1 MSMg01no145_b02.g1 CHROMAT_FILE:
MSMg01no145_b02.g1 PHD_FILE: MSMg01no145_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:03 2005
(433 letters)
>mm_chr6_49947187_49948015
Length = 829
Score = 791 bits (409), Expect = 0.0
Identities = 426/433 (98%), Gaps = 4/433 (0%)
Strand = Plus / Plus
Query: 1 aagggagctgagtgaatctcccaaggtcattttttgttgactaaagcttgtctgaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aagggagctgagtgaatctcccaaggtcattttttgttgactaaagcctgtctgaggcca 260
Query: 61 cagttcccttctcttaagcacaatgctgcatgctacctcctgtaattttagctgtgtttg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtccccttctcttaagcacaatgctgcatgctacctcctgtaattttagctgtgtttg 320
Query: 121 tagagcataaattggaaagcataaaaggtgagaaacagagtgaacgaacggtggagggaa 180
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 321 tagagcataaattggaaagcataaaaggtgagaaacagagtgaac--a--gtggagggaa 376
Query: 181 caaacaaaagaaacatacgaggactgtaatgtcagaggaccgaccactgtgacagcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caaacaaaagaaacatacgaggactgtaatgtcagaggaccgaccactgtgacagcttca 436
Query: 241 agaaatgccagcacacagattaagtccccccactgcctacatccccatccatctctccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agaaatgccagcacacagattaagtccccccactgcctacatccccatccatctctccat 496
Query: 301 ctttgaagtagcaatcagagagtgcaccctgcatctttagtgacatttaagaggcaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctttgaagtagcaatcagagagtgcaccctgcatctttagtgacatttaagaggcaaggc 556
Query: 361 tctttgcaaataaatgtaaatgctaaatgtgtccagtgagcactcagagatgaaaggtat 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctttgcaaataaatgtaaatgttaaatgtgtccagtgagcactcagagatgaaaggtat 616
Query: 421 gggtgaagctggc 433
|||||||||||||
Sbjct: 617 gggtgaagctggc 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 829
Length adjustment: 9
Effective length of query: 424
Effective length of database: 820
Effective search space: 347680
Effective search space used: 347680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
