CATTCCCTNNNNGACATTGGGCGCTAAGACTCCTATAGGGAGAGGATCCG
CGGAATTCCTGATCTTTCCAGACCTTTTATAACGCCTGGGTGTTGGATTT
TGTCAAATGCTTTCTCTTCATCTAATGAGATGACCCCGTGGTTTTTGTCT
TTGAGTTTGTTTATATACTGGATTACATTGATGGATTTCCGTATATTGAA
CCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGATTG
TTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTATTGAGGATTTTT
GCATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGG
GTCTTTTTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGT
TTGTTAGAGTATTTTCCATTTCTATTTTGTGGAATAGTTTGTGAAGAACT
GGAATTAGGTCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATC
TGGTCCTGGGCGTTTTTTGACTGGGAGACTATTAATAACTGCTTCTATTT
CTTTAGGGGATATGGGACTGTTTAGATGGTCAACTTGATCCTGATTCAAC
TTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTC
CAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGA
TTTCTTCAGGATCTGTTGTTATGTCTCCCTTTTCATTTCTGATTTTGTTA
ATTAAAATTTTGTTCCTGTGCCCTCTATTGAGTCTAGCTAAAAGTTTATC
TATCTTGTTGATTTTTCTCAAAGAACCAACTCCTCCTTTGGTTAATTCAT
TTGAATAGTTCTTTGTTCCACTTGGTTGATTTCACCCCTGAATTTGATTA
TTTCCTGTCCTTCTACTCCTCTTGTGTGAATTTGCTTCCCTTTTCTACTA
AATCCTTTTATTTGTGTTTGCCAAGCTTCTTAATGTTTGCCTCTTCTTCA
ATTTCTTTTTTTTGAGGCTCCTTCTAAACTTTTATTTTCTCCCTTTTTAG
GAAGGCTTTTCTCTTGTTTCTCTCATTATTATTCTCTTTTTGTTTTCTGC
TCTTCCTTTTCTTTTTTTATATTTCTATAAATTCACTTCTAATTTTCATC
TTCCTTTTATATTCTCTCCTCTTCATTTCCTCTCTCTCTTTCTACATATC
CATTTTTTA

CATTTTTTTNNNAAGCATGGAGGCTGGGGCGCCXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTTCACGCAAGAGTGCCTCTCTAGCA
GTTCTCTGAAGCCTTCCCAAACACTTGCTACCCCCACAAACATAAGCCTC
CTCTCTTCTAATTCCAAAGCAAAAGCAGAGGCTATGAAGTATCAAAAGCA
AATAGAAAAGCACATCAGATATTCTTTCAGCGTGGTGTGTTTGCATGGAG
ACAGCAACCACTTTGAAGTTCTAACTCTTTTGAGCATCTTTATCAGTAGT
TCCCCGGAGGTCCGTTCTTTTCTATCTTTTAAAAGACACATAGCATCGTC
CAAAAAATAATTACTGAGCTCTGATTATTTCTTAGGCTCTGGCCTTGGAT
TTGAGGGTATTTTGGCCAATAAGATAGATTTAGCCTCTGTTCCTGTGGAG
CTTGTAGTTTCAGGACAAATCAGCTATGAAATATCAGTTGTGTGGTAGGG
ACTTTATTCAAAACATTGGCAATCCAGGGAAACCCTCCACTAAAAGACAC
CCTTAAATTAAGCTCATAGGATACATAGGTGCATAAATGATCAAATGACT
AAACTCCCTAGTAACTCTCCAATGGCATGTATCTATCACAGCTACATTTT
TTTTAAACCAAAGGCAGTTTAACAAGGCTAACAGTACTCATCTTTGGGAA
AAAAATAAAGCATAGTAGCCTACAACTAATTTCTCTCTTAAAATTGGGCT
TCAATTTTATCAGTAGCCCAATTGATAAAAATTCCTTGCCATATTAGATC
TTTGCCCTAGGGGTAGGAAAGTACTGTTTTGTTTATAGGACACCTTAGTT
TGTATTGAAGCTTGGGAGATATGGGTGGGGGTGCTCCTATAAAAGCTCCC
TTATATGGTCGAAGTGATACTGTACCCCTTACTTTAGGTGCTTGGAGCTA
AAGGTTAGGATTTCCTCATATAATTAAACCCCTTTGTCTAAAGGAAAACT
GTTTATATATTTTGGAACCATTACTCGGAATTTTTTCTTCTCTACTAATG
GATTGATCAAAATTATACCAGTGTTACTCAAATTAATAATTTTTTAACAA
TTTCTCCATAACATGTCTTCTTTTTTGGCTAAAAAAAAGTTTCTCTTATT
GATACAATTAACTGTAATATTCTCTTCTCTCTTCTATTTTCTTCGTATAC
ATATACTGTC

Query= MSMg01no146_d04.g1 MSMg01no146_d04.g1 CHROMAT_FILE:
MSMg01no146_d04.g1 PHD_FILE: MSMg01no146_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:41 2005
         (748 letters)



>mm_chr6_109125863_109127010
          Length = 1148

 Score = 1193 bits (617), Expect = 0.0
 Identities = 718/757 (94%), Gaps = 13/757 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    agtgcctctctagcagttctctgaagccttcccaaacacttgctacccccacaaacataa 60
            |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 1092 agtgcctctctagcagttctctgaagccttcccaaacacttgctaccaacacaaacataa 1033

                                                                        
Query: 61   gcctcctctcttctaattccaaagcaaaagcagaggctatgaagtatcaaaagcaaatag 120
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1032 gcctcctctcttctaattccaaagcaaaagcagagactatgaagtatcaaaagcaaatag 973

                                                                        
Query: 121  aaaagcacatcagatattctttcagcgtggtgtgtttgcatggagacagcaaccactttg 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 972  aaaagcacatcagatattctttcagcgtggtgtgtttgcatggagacagcaagcactttg 913

                                                                        
Query: 181  aagttctaactcttttgagcatctttatcagtagttccccggaggtccgttcttttctat 240
            |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 912  aagtcctaactcttttgagcatctttatcagtagttccccgggggtctgttcttttctat 853

                                                                        
Query: 241  cttttaaaagacacatagcatcgtccaaaaaataattactgagctctgattatttcttag 300
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 852  cttttaaaagacacatagcaccgtccaaaaaataattactgagctctgattatttcttag 793

                                                                        
Query: 301  gctctggccttggatttgagggtattttggccaataagatagatttagcctctgttcctg 360
             |||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||| 
Sbjct: 792  tctctggacttagatttgagggtatttcagccaataagatagatttagcctctgttccta 733

                                                                        
Query: 361  tggagcttgtagtttcaggacaaatcagctatgaaatatcagttgtgtggtagggacttt 420
            |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 732  tggagcttgtagtttcaggataaatcagctatgaaacatcagttgtgtggtagggacttt 673

                                                                        
Query: 421  attcaaaacattggcaatccagggaaaccctccact--aaaagacacccttaaattaagc 478
            ||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||||||
Sbjct: 672  attcaaaacatcggcaatccagggaaatcctccactgaaaaag--acccttaaattaagc 615

                                                                        
Query: 479  tcataggatacataggtgcataaatgatcaaatgactaaac-------tccctagtaact 531
            ||||||||||||||||| ||||||||||||||||| |||||       ||||||||||||
Sbjct: 614  tcataggatacataggtacataaatgatcaaatgaataaacaaccgactccctagtaact 555

                                                                        
Query: 532  ctccaatggcatgtatctatcacagctacattttttttaaaccaaaggcagtttaacaag 591
            |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 554  ctccaatggcatgtatgtatcacagctacattttttt-aaaccaaaggcagtttaacaag 496

                                                                        
Query: 592  gctaacagtactcatctttgggaaaaaaataaagcatagtagcctacaactaatttctct 651
            ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 495  gctaacagtactcatctttgg-aaaacaataaagcatagtagcctacaactaatttctct 437

                                                                        
Query: 652  cttaaaattgggcttcaattttatcagtagcccaattgataaaaattccttgccatatta 711
            ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 436  cttaaaattggacttcaattttatcagtagcccaattgataaaaatcccttgccacatta 377

                                                 
Query: 712  gatctttgccctaggggtaggaaagtactgttttgtt 748
            ||||||||| |||||||||||||||||||||||||||
Sbjct: 376  gatctttgctctaggggtaggaaagtactgttttgtt 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 748
Length of database: 1148
Length adjustment: 10
Effective length of query: 738
Effective length of database: 1138
Effective search space:   839844
Effective search space used:   839844
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)