Query= MSMg01no147_c06.b1 MSMg01no147_c06.b1 CHROMAT_FILE:
MSMg01no147_c06.b1 PHD_FILE: MSMg01no147_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:39 2005
(605 letters)
>mm_chr6_47542620_47543626
Length = 1007
Score = 1098 bits (568), Expect = 0.0
Identities = 592/600 (98%), Gaps = 2/600 (0%)
Strand = Plus / Minus
Query: 5 gaattcatattcagaaataaaagtcaattttacttagaagaatgtggaaatatttaggtt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaattcatattcaggaataaaagtcaattttacttagaagaatgtggaaatatttaggtt 745
Query: 65 atatttaatttcctgttcttgtattctcaagttggaaacggattggattctggtcttaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atatttaatttcctgttcttgtattctcaagttggaaacggattggattctggtcttaaa 685
Query: 125 cgaaaagaa-cctgccttttctctttggagaggtgtactagagaatgaaaattgcattag 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cgaaaagaatcctgccttttctctttggagaggtgtactagagaatgaaaattgcattag 625
Query: 184 gaaaacttaggaaaattgcatcctatattctaattttcatgggttttgaatatatttctt 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 624 gaaaacttaggaaaattgcatcctatattctaattttgatgggttttgaatatatttctt 565
Query: 244 -aaaaaaaaaaccaaaaaaacccaaaagaacagactcttgttgcactgtttcatctaatg 302
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaaaaaaaaaacaaaaaaaaaccaaaagaacagactcttgttgcactgtttcatctaatg 505
Query: 303 aagacctaaagtacatctgctaatttacggtttcatatgaatggagacaaagaaatgcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagacctaaagtacatctgctaatttacggtttcatatgaatggagacaaagaaatgcag 445
Query: 363 tgtcaaatttctgttgtttctgatttgcaggagcatcgtagaatagacattccaggtgca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtcaaatttctgttgtttctgatttgcaggagcatcgtagaatagacattccaggtgca 385
Query: 423 gctctaaatgttgagattgtagcataaggtttatgtttacattaaaatcctattgataat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gctctaaatgttgagattgtagcataaggtttatgtttacattaaaatcctattgataat 325
Query: 483 ttcattcattatgaggcgagctagttgtatagaattttggtagaaaattagtttagaatt 542
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcattcattatgaggtgagctagttgtatagaattttggtagaaaattagtttagaatt 265
Query: 543 taacaattcagttttgcctgaatatgtgattttttcctgtagttgacatttgctgttttg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taacaattcagttttgcctgaatatgtgattttttcctgtagttgacatttgctgttttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1007
Length adjustment: 10
Effective length of query: 595
Effective length of database: 997
Effective search space: 593215
Effective search space used: 593215
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_c06.g1 MSMg01no147_c06.g1 CHROMAT_FILE:
MSMg01no147_c06.g1 PHD_FILE: MSMg01no147_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:39 2005
(197 letters)
>mm_chr6_47477377_47477973
Length = 597
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 1 aaggccatcctggtctatatagcaagttctaggccaacctaggatacatggaagaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaggccatcctggtctatatagcaagttctaggccaacctaggatacatggaagaccttg 259
Query: 61 tctcaaaagggggaaaaaaaa-acccacacacacaaaaacctggaaggttcacaggaagc 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctcaaaagggggaaaaaaaacacccacacacacaaaaacctggaaggttcacaggaagc 319
Query: 120 ttcaaatatctagaaatgaggtcaatgtggactataggtgggtttctggtagttagataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttcaaatatctagaaatgaggtcaatgtggactataggtgggtttctggtagttagataa 379
Query: 180 aaatcggcattcttcag 196
|||||||||||||||||
Sbjct: 380 aaatcggcattcttcag 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
