Query= MSMg01no148_a14.b1 MSMg01no148_a14.b1 CHROMAT_FILE:
MSMg01no148_a14.b1 PHD_FILE: MSMg01no148_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:48 2005
(502 letters)
>mm_chr6_126551229_126552130
Length = 902
Score = 874 bits (452), Expect = 0.0
Identities = 488/500 (97%), Gaps = 2/500 (0%)
Strand = Plus / Plus
Query: 1 tcctccctggggacagagagaacatgggtctgtagacggccatgcttacacagcgctgtg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tcctccctggggacagagagaacatgggtctgtagacggtcatgcttacacagcgctgtg 260
Query: 61 tgaaggtgaccacgaatgtgatggtggcagagaccctaagctaactgaggctgttggtgg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaggtgaccacgaatgtggtggtggcagagaccctaagctaactgaggctgttggtgg 320
Query: 121 agccgcctgggaaagtggaaaaccctgagcaacaaacaccgctatgtctgggagaacaag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agccgcctgggaaagtggaaaaccctgagcaacaaacactgctatgtctgggagaacaag 380
Query: 181 gacagaaggattgtatttggtccttggggtacccatgtgggactggagggaaagctttca 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gacagaaggattgtatttggtccttggggtacccatgtgggactggaggaaaagctttca 440
Query: 241 tagtggggtcccgtcacaacgccattggggaagaagactgctttggcagtctttctgaaa 300
|||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 441 tagtggggtcccgtcacaacaccattgggaaagaagactgcttcggcagtctttctgaaa 500
Query: 301 tgctcacctacagatctctgagcactgtggactcccatccgctccagcttctc-aaagct 359
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 501 tgctcacctacagatctctgagcactgtggactcccatccgctccagctt-tccaaagct 559
Query: 360 acctctctccctgggaatctaagccttttgcccacacactcaaactccaccccaaagcgt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 560 acctctctccctgggaatctaagccttttgcccacacactcaaactccaccccaaagcat 619
Query: 420 gctcactgaactactccaactccaacctcccttttcctattgacaacatctccgtggccc 479
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 gctcactgaactactccaattccaacctcccttttcctattgacaacatttccgtggccc 679
Query: 480 aatctgagcaaacagcacag 499
||||||||||||||||||||
Sbjct: 680 aatctgagcaaacagcacag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_a14.g1 MSMg01no148_a14.g1 CHROMAT_FILE:
MSMg01no148_a14.g1 PHD_FILE: MSMg01no148_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:48 2005
(492 letters)
>mm_chr6_126703077_126703973
Length = 897
Score = 866 bits (448), Expect = 0.0
Identities = 481/494 (97%), Gaps = 5/494 (1%)
Strand = Plus / Minus
Query: 1 tgtatgctttgcaatgcctgaagctgaggactcagatttttgccttcacc-acacaatac 59
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 694 tgtatgctttgcaatgcctgaagttgaggactcagatttttgccttcaccaacacaatac 635
Query: 60 aaccccacattcattaatgggactg----ttttttttttccttctgatgaactcactctg 115
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 634 aaccccacattcattaatgggactgttttttttttttttccttctgatgaactcactctg 575
Query: 116 gaaatagacaggaaactcaacatacttttgagagttttaatgatgagtgaattaggtaat 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaaatagacaggaaactcaacatacttttgagagttttaatgatgagtgaattaggtaat 515
Query: 176 tcctattgtaagacctccccctcccccttttcccttccttggaccttcaaaggcagtatg 235
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcctattgtaagacctccccttcccccttttcccttccttggaccttcaaaggcagtatg 455
Query: 236 gggcaacacaggaatactctggaatggaaggggaagaggagagaagccctggggtgacca 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gggcaacacaggaatactctggaatggaaggggaagaggagagaagccctggggtgacca 395
Query: 296 gtgtttgcatcccctccttacttgtatgctggtcacagcacagctgcacccagtgtcttt 355
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 394 gtgtttgcatcccctccctacttgtatgctggtcacagcacagctgcagccagtgtcttt 335
Query: 356 cggggaaccccctctgagaatcaggagttgggctctgtgggcagcaaggcatgaggcccc 415
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 334 ctgggaaccccctctgagaatcaggagttgggctctgtgggcagcaaggcacgaggcccc 275
Query: 416 ttctttactctggttggtttgtggggcggcggagttgcttctgcttttgcttgtgggaga 475
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 274 ttctttactctggttggtttgtggggcggtggagttgcttctgcttttccttgtgggaga 215
Query: 476 gatgtatctctttc 489
||||||||||||||
Sbjct: 214 gatgtatctctttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 897
Length adjustment: 10
Effective length of query: 482
Effective length of database: 887
Effective search space: 427534
Effective search space used: 427534
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
