Query= MSMg01no148_b14.b1 MSMg01no148_b14.b1 CHROMAT_FILE:
MSMg01no148_b14.b1 PHD_FILE: MSMg01no148_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:53 2005
(344 letters)
>mm_chr6_70542676_70543419
Length = 744
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Minus
Query: 1 gcctttagtgtttcctctttcagagtggatgagtctgggcagtttccttttcttacagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcctttagtgtttcctctttcagagtggatgagtctgggcagtttccttttcttacagta 485
Query: 61 aggttactgtttctttcaatttcttgactgtccttacatgtagcagttatctgcaaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aggttactgtttctttcaatttcttgactgtccttacatgtagcagttatctgcaaggct 425
Query: 121 attcagaaatctttaggcctgcatggttgtgaggtcaccactaggctgtaaccttagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 attcagaaatctttaggcctgcatggttgtgaggtcaccactaggctgtaaccttagttt 365
Query: 181 ttcttctcattgagcattctccagacatcaattataaaagactgaaatggcagtcttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcttctcattgagcattctccagacatcaattataaaagactgaaatggcagtcttcag 305
Query: 241 gaaattatttaaaatatgtactggttgtagggctagttcctgtaccttccttctaatatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaaattatttaaaatatgtactggttgtagggctagttcctgtaccttccttctaatatc 245
Query: 301 tgggattgatttgtttatgaatgtatttgtttacatttagtttt 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgggattgatttgtttatgaatgtatttgtttacatttagtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_b14.g1 MSMg01no148_b14.g1 CHROMAT_FILE:
MSMg01no148_b14.g1 PHD_FILE: MSMg01no148_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:53 2005
(585 letters)
>mm_chr6_70156949_70157927
Length = 979
Score = 920 bits (476), Expect = 0.0
Identities = 556/586 (94%), Gaps = 10/586 (1%)
Strand = Plus / Plus
Query: 1 ctagaagacactgggccatggtgcctttcgtgagaatt-tgaaccccacctcagataagg 59
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ctagaagacactgggccatggtgcctttcgtgagaattgtgaaccccacctcagataagg 260
Query: 60 tcaatggcaacagccacacacaaggttgtctcctgatattcacccacatgccatggcaag 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaatggcaacagccacacacaagattgtctcctgatattcacccacatgccatggcaag 320
Query: 120 ggaaatttccttcaaatcaatatgaacacatatagacacc-ccaaaaaaacatagagaaa 178
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 321 ggaaatttccttcaaatcaatatgaacacatatagacaccaccaaaaa--catagagaaa 378
Query: 179 aaataaaataagtaattgtcctaggaattaattatattagacctcttaattgagtcttta 238
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 379 aaataaaataagtaattatcctaggaattaattatattagtcctcttaattgagtcttta 438
Query: 239 tttttattccgtcttagaaagcattatctttgtgtgtataaaatcttgagggatcaagtt 298
|||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||
Sbjct: 439 tttttattccgtcttagaaaacattatcattgtgtgtatataatcttgagggatcaagtt 498
Query: 299 gttcttgaaatatctttacatcctttacactgtatatttattttgcccccccccatatca 358
|||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||
Sbjct: 499 gttcttgaaatatctttacatcctttacactgtacatttgttttgcattcttccatatca 558
Query: 359 cacctcagaaaaactacagggaaatgatttaataaaatagacttgcaagctcctttaaga 418
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 559 cacctcagaaaaactacagggaaaagatttaataaaatagacttgcaaactcctttaaga 618
Query: 419 tgcacatgtgatgttgtagtaaattttctgctgacaccaacttcctgtgggtgaaacagg 478
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 619 tacacatgtgatgttgtagtaaattttctgctgacaccaacttcctgtgtgtgaaacagg 678
Query: 479 agcaggtgtcctttgagaggcagcacacacttggctgagatgatttgtatatagagacat 538
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 679 agcaggtgtcctttgagaagcagcacacacttggctgagatgatttgtatatagagtcat 738
Query: 539 agctgtcatacaacagcccaggctcctttaaaggcagctgccatga 584
| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 739 ---t---atacaacatcccaggctcctttaaaggcagctgccatga 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 979
Length adjustment: 10
Effective length of query: 575
Effective length of database: 969
Effective search space: 557175
Effective search space used: 557175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
