Query= MSMg01no148_h08.b1 MSMg01no148_h08.b1 CHROMAT_FILE:
MSMg01no148_h08.b1 PHD_FILE: MSMg01no148_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:22 2005
(314 letters)
>mm_chr6_128749384_128750101
Length = 718
Score = 456 bits (236), Expect = e-133
Identities = 296/318 (93%), Gaps = 4/318 (1%)
Strand = Plus / Minus
Query: 1 aggtgcgggagtgtgtttgctggggtgaccggcagggggcgcggggcgaaaggagactt- 59
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 453 aggtgcgggagtgtgtttgctggggtgaccggcagggggcgcggggcgaaaagaggcttc 394
Query: 60 ---cggggctcgtgatgctgcggttccctagagtgaggggtggctgacgttaggcgggaa 116
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gggcggggctcgtgaggttgcggttccctagagtgaggggtggctgacgttaggcgggaa 334
Query: 117 gtgtgcgtgagacgggcagagaaccgcatgagccaggttgacggtgcggtctggggcgaa 176
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 333 gtgtgcgtgagaccggcagagaaccgcatgagccaggttgacggtgcggtttggggcgaa 274
Query: 177 ggcctgctgggcgttgtaccctatagtctcctcgttggagaaagcggtgacgtcatagaa 236
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 273 ggcctgctgggcgttgtaccctacaatctcctcgttggagaaagcggtgacgtcatagaa 214
Query: 237 tacatagctaagtttattcggagcagcagtaacgcttgccggttctggtggcgcaggccg 296
||||||||||||| | ||| ||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 213 tacatagctaagtagaatcgttgcagcagcaacgcctgccggtcctggtggcgcaggccg 154
Query: 297 gcacgatttgctgaagga 314
| | ||||||||||||||
Sbjct: 153 gtaggatttgctgaagga 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 718
Length adjustment: 9
Effective length of query: 305
Effective length of database: 709
Effective search space: 216245
Effective search space used: 216245
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_h08.g1 MSMg01no148_h08.g1 CHROMAT_FILE:
MSMg01no148_h08.g1 PHD_FILE: MSMg01no148_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:22 2005
(344 letters)
>mm_chr6_128724123_128724866
Length = 744
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 tcagtttctcttc-agtaccatgtctacctgctcgctgccatgcttcctgtcatgatgat 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcagtttctcttccagtaccatgtctacctgctcgctgccatgcttcctgtcatgatgat 259
Query: 60 aatgaactgaacctctgaaactgtaatccagccccaatgaaatgtttgcctttataagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatgaactgaacctctgaaactgtaatccagccccaatgaaatgtttgcctttataagag 319
Query: 120 ttatcttggtcatggtgtcttttcacagcaatgaaaccgtaactaagacaggtgctaaga 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttatcttggtcatggtgtctcttcacagcaatgaaaccgtaactaagacaggtgctaaga 379
Query: 180 aactttctggaggcacaagcccattcttgatctgggcattaacaaaggactcaaaacctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactttctggaggcacaagcccattcttgatctgggcattaacaaaggactcaaaacctt 439
Query: 240 taattggattaattagcaagcttgtcagtaccaatctcttttggatcatttcattaccag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taattggattaattagcaagcttgtcagtaccaatctcttttggatcatttcattaccag 499
Query: 300 gtattttagtcagacttttgttgctatgataaacaccatgacca 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtattttagtcagacttttgttgctatgataaacaccatgacca 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
