Query= MSMg01no148_k11.b1 MSMg01no148_k11.b1 CHROMAT_FILE:
MSMg01no148_k11.b1 PHD_FILE: MSMg01no148_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:37 2005
(537 letters)
>mm_chr6_98603035_98603971
Length = 937
Score = 969 bits (501), Expect = 0.0
Identities = 525/533 (98%)
Strand = Plus / Plus
Query: 5 ggaattcttattctttacttgggtttctgtttaccaacctcttgtccttgtgatttctgg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttattctttatttgggtttctgtttaccaacctcttgtccttgtgatttctgg 264
Query: 65 attctggtcaggttccttggtttataaagaagctcaaaatacccttccttgagtctactt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attctggtcaggttccttggtttataaagaagctcaaaatacccttccttgagtctactt 324
Query: 125 gtaatactctctccagacctttaaatgctgttctagtggcccaaagcagttactgctctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaatactctctccagacctttaaatgctgttctagtggcccaaagcagttactgctctt 384
Query: 185 cccactttaattttaggtactacataagctacagcacaaaatctattattatgtaaattc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccactttaattttaggtactacataagctacagcacaaaatctattattatgtaaattc 444
Query: 245 atttacccaagacaattcacagtccacatgaagctcaagaagaagaaagaccaaagtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttacccaagacaattcacagtccacatgaagctcaagaagaagaaagaccaaagtgtg 504
Query: 305 gatgcttcagtccttcttagaaagggaaacaaaatacttacaggaacaaatatggagata 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 gatgcttcagtccttcttagaaagggaaataaaatacttacaggaacaaatatggagata 564
Query: 365 aagtgtacaccacacactgaaggaaacaccaaccagaactgtcccacctgggaattcatc 424
||||||| | || | ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 aagtgtagagcagagactgaaggaaacaccaaccagaactgtcccacctggggattcatc 624
Query: 425 ccatatacagtcaccaaacccggacactattgtggataccaagaaatgcttgctaaaaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccatatacagtcaccaaacccggacactattgtggataccaagaaatgcttgctaaaaag 684
Query: 485 gagcctgatggagctgtctcatgagagaccctgtcacagccttacaaatacag 537
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 685 gagcctgatggagctgtctcatgagagaccctgccacagccttacaaatacag 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_k11.g1 MSMg01no148_k11.g1 CHROMAT_FILE:
MSMg01no148_k11.g1 PHD_FILE: MSMg01no148_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:37 2005
(537 letters)
>mm_chr6_98691501_98692435
Length = 935
Score = 980 bits (507), Expect = 0.0
Identities = 529/537 (98%), Gaps = 2/537 (0%)
Strand = Plus / Minus
Query: 1 tttgctttggtccacacatttatgctcattaattagtatggtgctcagaaaaaaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tttgctttggtccacacatttatgctcattaattagtatggtgctcagaaaaaaaaaaaa 676
Query: 61 accaaaaaacaaacccacaatcatttgctgaataaacaaatcaataaatgtattagttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 --caaaaaacaaacccacaatcatttgctgaataaacaaatcaataaatgtattagttat 618
Query: 121 atgatcatactgacatttccagaaaattatactgttgatgattaatggataaacttggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atgatcatactgacatttccagaaaattatactgttgatgattaatggataaacttggaa 558
Query: 181 gaggtaagcatagctagaggaaaaggaaaggctgcttgaaagcctaaagagggttgaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 557 gaggtaagcatagctagaggaaaaggaaaggctgcttgaaagcctaaagagggttgaggg 498
Query: 241 acaatgtaaatatgggccagggagaggatggtagaaaatgctaaactagtctatgttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acaatgtaaatatgggccagggagaggatggtagaaaatgctaaactagtctatgttatt 438
Query: 301 taggggatggtattattaggctctagattggataccgacagcaacaccctaggtctccct 360
|||||||||||||||||| |||||||||||||||||||||| || | ||||||||||||
Sbjct: 437 taggggatggtattattaagctctagattggataccgacagtaatattctaggtctccct 378
Query: 361 cactctggtttctcattaatagatattcaacaaattcataagttgattattaaacatagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cactctggtttctcattaatagatattcaacaaattcataagttgattattaaacatagg 318
Query: 421 cactaagaaatattaaattacattaacttacagtagcctatatcaaaccacaggtgacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cactaagaaatattaaattacattaacttacagtagcctatatcaaaccacaggtgacat 258
Query: 481 gcatttaaaaaatcattgcgtcctactcactttgtttcagctttgcactgttgagac 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcatttaaaaaatcattgcgtcctactcactttgtttcagctttgcactgttgagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 935
Length adjustment: 10
Effective length of query: 527
Effective length of database: 925
Effective search space: 487475
Effective search space used: 487475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
