Query= MSMg01no149_p17.b1 MSMg01no149_p17.b1 CHROMAT_FILE:
MSMg01no149_p17.b1 PHD_FILE: MSMg01no149_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:25 2005
(588 letters)
>mm_chr6_76816505_76817492
Length = 988
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Minus
Query: 173 tgaagggtcaccagaggttttgtgctggtataattaatattatgaaaatggctgtactgt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 tgaagggtcaccagaggttttgtgctggtataattaatattatgaaaatggctgtactgt 929
Query: 233 caagagtgttccacaggttccatgaaatgcccctgaaaatgttaatcacattcttcacag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 caagagtgttccacaggttccatgaaatgcccctgaaaatgttaatcacattcttcacag 869
Query: 293 aaactgaacaaataagaaccctaaaataaataagtgcaagagagcctaaacagtaaaacc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aaactgaacaaataagaaccctaaaataaataagtgcaagagagcctaaacagtaaaacc 809
Query: 353 aattctgagaaaaaaaaatatgcggaaggtttcataatattggatttcaaaacataacaa 412
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 808 aattctgagaaaaaaaaatatgtggaaggtttcataatattggatttcaaaacataacaa 749
Query: 413 agagggctggagagacactgctcttgttcaggacacaagttcactgtttagcacctttgt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agagggctggagagacactgctcttgttcaggacacaagttcactgtttagcacctttgt 689
Query: 473 caattaatacacaacctccttctctcactccagctccttggttatctaacatccctgggc 532
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 688 caattaatacacaacctccttctctaactccagctccttggttatctaacatccctgggc 629
Query: 533 aatatgggaggctgcacacacacacacacacacacacacacacacacacacacaca 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aatatgggaggctgcacacacacacacacacacacacacacacacacacacacaca 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_p17.g1 MSMg01no149_p17.g1 CHROMAT_FILE:
MSMg01no149_p17.g1 PHD_FILE: MSMg01no149_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:25 2005
(580 letters)
>mm_chr6_76673972_76674951
Length = 980
Score = 1091 bits (564), Expect = 0.0
Identities = 575/580 (99%), Gaps = 3/580 (0%)
Strand = Plus / Plus
Query: 1 tttagactacttcatgctgattaaagtcatcaggtcccttggatcaagaccagtcttcct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 tttagactacttcatgctgattaaggtcatcaggtcccttggatcaagaccagtcttcct 263
Query: 61 catcaggatatcttcagccagtaatccagaaaaccatcagtctggcaaacatcaaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catcaggatatcttcagccagtaatccagaaaaccatcagtctggcaaacatcaaaagca 323
Query: 121 gcagcaggaaccagcagcagtagagctagcagcaggaaccaggagcagcagggctagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagcaggaaccagcagcagtagagctagcagcaggaaccaggagcagcagggctagaac 383
Query: 181 aggaggatcagccaaaacctctcaggggctctggcatttagacaccctctcaagagtccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggaggatcagccaaaacctctcaggggctctggcatttagacaccctctcaagagtccc 443
Query: 241 aggaattctaaatgtaaactatcttcagcaggcagaatcaatcatggccctaccagagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggaattctaaatgtaaactatcttcagcaggcagaatcaatcatggccctaccagagca 503
Query: 301 tgagacaaatcatagctgctgtggacaatctgaaacagccccatatcctacatctcataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgagacaaatcatagctgctgtggacaatctgaaacagccccatatcctacatctcataa 563
Query: 361 taaaacaaaaacagattcacataatgtaactgtgtttttaaagaaaccaaaattcttact 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaacaaaaacagattcacat---gtaactgtgtttttaaagaaaccaaaattcttact 620
Query: 421 acactgtcactgtctagctaatgtggtttatttaaatttcaacagctttgtagttttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acactgtcactgtctagctaatgtggtttatttaaatttcaacagctttgtagttttgtt 680
Query: 481 ttacatcttatcttttgctttgattttatggtcatggacatgcacttttaaaactctatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttacatcttatcttttgctttgattttatggtcatggacatgcacttttaaaactctatg 740
Query: 541 ggattacatatttaaataacattatcatgaataatttgat 580
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 ggattacatatttaaataaaattatcatgaataatttgat 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
