Query= MSMg01no150_a11.b1 MSMg01no150_a11.b1 CHROMAT_FILE:
MSMg01no150_a11.b1 PHD_FILE: MSMg01no150_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:29 2005
(372 letters)
>mm_chr6_76968597_76969368
Length = 772
Score = 588 bits (304), Expect = e-172
Identities = 315/320 (98%), Gaps = 3/320 (0%)
Strand = Plus / Minus
Query: 52 ctggagtctaacttcttgagttctttgtatatattggatattagccctctatcggattta 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ctggagtctaacttcttgagttctttgtatatattggatattagccctctatcggattta 713
Query: 112 ggattggtaaagatcttttcccaacctattggttgcctttttttttt---aattgacaga 168
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 712 ggattggtaaagatcttttcccaacctattggttgccttttttttttttaaattgacaga 653
Query: 169 gtcctttgccttacagaagctttgcaaattttatgaggtcccatttgtcaattcttgatc 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gtcctttgccttacagaagctttgcaaattttatgaggtcccatttgtcaattcttgatc 593
Query: 229 ttatagcacaagccattggtgttcatcctctcatctttatttaataaattccttggtgta 288
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 592 ttatagcacaagccattggtgttcatcctttcatctttatttaataaattccttggtgta 533
Query: 289 cttaataattccttggtgtacttaataattttgagtatttagttttatatgtagtcattt 348
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttaagaattccttggtgtacttaataattttgagtatttagttttatatgtagtcattt 473
Query: 349 gttcctttttaccaaagccc 368
||||||||||||||||||||
Sbjct: 472 gttcctttttaccaaagccc 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_a11.g1 MSMg01no150_a11.g1 CHROMAT_FILE:
MSMg01no150_a11.g1 PHD_FILE: MSMg01no150_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:29 2005
(547 letters)
>mm_chr6_76835006_76835952
Length = 947
Score = 988 bits (511), Expect = 0.0
Identities = 538/547 (98%)
Strand = Plus / Plus
Query: 1 cacattttcagtttttcccattatccctccagtgggtgtagaaaaggcagcaacatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacattttcagtttttcccattatccctccagtgggtgtagaaaaggcagcaacatgttg 260
Query: 61 ggccaattagaacacatctgtcttgattactatgcaacctgaaaagatctttctcccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ggccaattagaacacatctgtcttgattactatgcaacctgaaaagatcgttctcccatg 320
Query: 121 cctctcaatgggaactatgatcatttccgcatcaggtttccaggttttaagagtgagtgg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 cctctcaatgggaactatgatcatttccgcatcaggttttcaggttttaagagtgagtgg 380
Query: 181 tacatattcacaaagttaattaattgtgtagaatagaaagtgaagttatatgccagtgat 240
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tacatattcataaagttaattaattgggtagaatagaaagtgaagttatatgccagtgat 440
Query: 241 aatattgctttggggggttatgatagaattagtagactgagacacgatatgtctattata 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 aatattgctttggggggttatgatagaattagtagactgagacacgatgtgtctattata 500
Query: 301 atatcaaatgactcttgaagaatgaatactggggaatagaacggatctgaataaaaagat 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 atatcaaatgactcttgaagaatgaatactggggaatagaatggatctgaataaaaagat 560
Query: 361 acaagtagtttggagattactgccatagatcccatttctagatagcttcagcaaagctag 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 acaagtagtttggagattactgccatagatcccatttctagattgcttcagcaaagctag 620
Query: 421 gagagagcctgcctcatcttcaaaactcattttgtctcccagcctgacacaggaatcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagagcctgcctcatcttcaaaactcattttgtctcccagcctgacacaggaatcctg 680
Query: 481 tgagataacctcatatattgttgggagtgtgaaggctctgagatataaacctagtggttt 540
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagatgacttcatatattgttgggagtgtgaaggctctgagatataaacctagtggttt 740
Query: 541 tgttcaa 547
|||||||
Sbjct: 741 tgttcaa 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
