TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTTATCTGTAATCTGGCCTCAATTCTGTATATTTTTATTTTTAATCTTT
ATTTTCATCAATATTTTATAACTTTCCCATATCACCTTTTAAAATACATT
TATCACATTGTTTTTAATTTTTATATTATTCTTTTGTAGTAAGTCAGGTT
CAGGTACATGTATAAATTGATTTATCTTTCCTTTATTGCTTGAAATTATG
AATAATATAGCTGGTAATAAAATACATTTCTTCATTGTCACAGTCAATAT
TTTCCAATCATTTTATATAACTTCTTAAATCCAAATTCCATAGAGCTTCT
TGTGTTTTCTCCAGGGAAGACAGGTGGGAATAAGGATCTGAGCTCATATG
AGCTTTACATCATATGTTTGTTAATGAATATCCTGCAAGTCTTACTATGT
ATTAAAGTTTGGCTTATCTTGGCTGTTCCAATTGACTGTCTGGCTCATCA
TCTTGAATTCTCAAATCATCATGATATTTGAGCTAGATTTGACAATATGA
TTTCCATTCTTTTTTGTGAAGGGTACAGGGGTCATTATGACATTCACAGT
TGTCAGTGATAACTCTTCCAGAGACCAATCAGATTATTTAAGTAATAAAA
TAATCATTTTTTTAAATTGAAATGTTGAGTGGAATTCAAATAGTTAAATA
TTTCCAATAAATCACTAAGATGGAGATATTTAT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCATCCTCTTGAGGAAGTGCCACACTGATT
TCCATTCTATCTGTATAAGAATCTAATCCTACAAGCATTGGATGGTGTTC
TCCTTACTCCACAGCCACTCCAGCATGAGTGTCCTGTTTTGCTGTTCTTA
GTCAGTTTGCCTGGTGTAAAATGAAATCTCGTAGTAGATTTGATTTGCAT
TTCACTGATTGCGAAGCATAATAAATATTTAAGTATTAATCAGCCATTTG
AATTTCTTCTTTGAAATTCTGTTTATATCTGTACCTCATTTTTCATTTGG
TTATTCACTTTATTGATATATAGATTTTGGATAATAGTCTTCTATCAGAT
ACGCAGTTAATAAAAATCTTTTCACATTATGTAAGCTAACACTTGTCCTT
TGCCATGCAGACACTTTTTGATTGATATTAGGTAGCAGTTATTACTTGTT
TATCTCAGTGCCTGTGCTAATGGTGTTATCTTTAGGAAGTCTTTTTCCTG
GACAAATAGTTTACTTTCCACTTTCTGTTCCATTGGACCCAATGTATTTG
GATTTATGTTGTGGGCATTGCTCCATTTGGAGTTTATTTTTGTTCAGGAT
CTATGTATCTGTCTGATTTTTTTTTCATACAGACACCCATTTTGAGCCAT
ACAATTGACTGACGATGCCATCTTTT

Query= MSMg01no150_j07.b1 MSMg01no150_j07.b1 CHROMAT_FILE:
MSMg01no150_j07.b1 PHD_FILE: MSMg01no150_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:10 2005
         (687 letters)



>mm_chr6_79305001_79306084
          Length = 1084

 Score = 1232 bits (637), Expect = 0.0
 Identities = 672/685 (98%), Gaps = 7/685 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttatctgtaatctggcctcaattctgtatatttttatttttaatctttatttt 64
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccttatctgaaatttggcctcaattctgtatatttttatttttaatctttatttt 263

                                                                       
Query: 65  -catcaatattttataactttcccatatcaccttttaaaatacatttatcacattgtttt 123
            |||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||
Sbjct: 264 tcatcaatattttataactttcccatattgccttttaaaatacatttatcacattgcttt 323

                                                                       
Query: 124 taatttttatattattcttttgtagtaagtcaggttcaggtacatgtataaattgattta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taatttttatattattcttttgtagtaagtcaggttcaggtacatgtataaattgattta 383

                                                                       
Query: 184 tctttcctttattgcttgaaattatgaataatatagctggtaataaaatacatttcttca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctttcctttattgcttgaaattatgaataatatagctggtaataaaatacatttcttca 443

                                                                       
Query: 244 ttgtcacagtcaatattttccaatcattttatataacttcttaaatccaaattccataga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgtcacagtcaatattttccaatcattttatataacttcttaaatccaaattccataga 503

                                                                       
Query: 304 gcttcttgtgttttctccagggaagacaggtgggaataaggatctgagctcatatgagct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcttcttgtgttttctccagggaagacaggtgggaataaggatctgagctcatatgagct 563

                                                                       
Query: 364 ttacatcatatgtttgttaatgaatatcctgcaagtcttactatgtattaaagtttggct 423
           ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttacat---atgtttgttaatgaatatcctgcaagtcttactatgtattaaagtttggct 620

                                                                       
Query: 424 tatcttggctgttccaattgactgtctggctcatcatcttgaattctcaaatcatcatga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcttggctgttccaattgactgtctggctcatcatcttgaattctcaaatcatcatga 680

                                                                       
Query: 484 tatttgagctagatttgacaatatgatttccattctt-ttttgtgaagggtacaggggtc 542
           ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 681 tatttgagctagatttgacaatatgatttccattcttctttt-tgaagggtacaggggtc 739

                                                                       
Query: 543 attatgacattcacagttgtcagtgataactcttccagagaccaatcagattatttaagt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 attatgacattcacagttgtcagtgataactcttccagagaccaatcagattatttaagt 799

                                                                       
Query: 603 aataaaataatcatttttttaaattgaaatgttgagtggaattcaaatagttaaatattt 662
           ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 800 aataaaataatcatttttt-aaattgaaatgttgagtggaattgaaatagttaaatattt 858

                                    
Query: 663 ccaataaatcactaagatggagata 687
           |||||||||||||||||||||||||
Sbjct: 859 ccaataaatcactaagatggagata 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1084
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1074
Effective search space:   727098
Effective search space used:   727098
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)