Query= MSMg01no150_k05.b1 MSMg01no150_k05.b1 CHROMAT_FILE:
MSMg01no150_k05.b1 PHD_FILE: MSMg01no150_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:15 2005
(346 letters)
>mm_chr6_46598138_46598883
Length = 746
Score = 625 bits (323), Expect = 0.0
Identities = 341/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Plus
Query: 1 aagatacttagaaatttgagtaacctctttgattttagtatgaggtgatacatagtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatacttagaaatttgagtaacctctttgattttagtatgaggtgatacatagtcatt 260
Query: 61 ctctattaccacccaattttaccatctgagcgttggagattttatcttttgttattggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctattaccacccaattttaccatctgagcgttggagattttatcttttgttattggct 320
Query: 121 tttcccctttttaaaataatttttatttcttatttcttccacaaatattttctttttt-a 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tttcccctttttaaaataatttttatttcttatttcttccacaaatattttcttttttta 380
Query: 180 ttttgttttttttattaggtatttatttcatttacatttccaatgctatcccaaaagtcc 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgttttttt-attaggtatttatttcatttacatttccaatgctatcccaaaagtcc 439
Query: 240 ccaacacgctcccccacccacccactccctcttcttggccctggcattcccttgtactga 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccaacatgctcccccacccacccactccctcttcttggccctggcattcccttgtactga 499
Query: 300 gacagataaagtttgcactaccaattgtcctctttttccagtgatgg 346
||||||||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 500 gacagataaagtttgcactaccaatgggcctctctttccagtgatgg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_k05.g1 MSMg01no150_k05.g1 CHROMAT_FILE:
MSMg01no150_k05.g1 PHD_FILE: MSMg01no150_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:15 2005
(302 letters)
>mm_chr6_46675194_46675895
Length = 702
Score = 571 bits (295), Expect = e-167
Identities = 301/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 1 aatatagccaggcggtggtgacacacacctttaatcccagcacttggcaggcagatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aatatagccaggcggtggtgacacacacctttaatcccagcacttggcaggcagatttct 547
Query: 61 gagttcgaggccagcctggtctacagaatgagttccaggacagtcaggtctatacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gagttcgaggccagcctggtctacagaatgagttccaggacagtcaggtctatacagaga 487
Query: 121 aaccctgtctcaaaaaagaaaaagatgaattcaatatatattttgtgaggagggtggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaccctgtctcaaaaaagaaaaagatgaattcaatatatattttgtgaggagggtggaag 427
Query: 181 ttacaattcaacacacacacttgggaactttaaaaaaaaatcagtatcatttagttttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttacaattcaacacacacacttgggaactttaaaaaaaaatcagtatcatttagttttct 367
Query: 241 tcttagtgtagctgttccacttgaaaacaaaacaaaacaaaacacccccc-aaaaacaaa 299
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 366 tcttagtggagctgttccacttgaaaacaaaacaaaacaaaacacccccccaaaaacaaa 307
Query: 300 aac 302
|||
Sbjct: 306 aac 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
