Query= MSMg01no150_m20.b1 MSMg01no150_m20.b1 CHROMAT_FILE:
MSMg01no150_m20.b1 PHD_FILE: MSMg01no150_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:27 2005
(321 letters)
>mm_chr6_30029868_30030587
Length = 720
Score = 547 bits (283), Expect = e-160
Identities = 310/319 (97%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 3 ggaattctcctactgttaaactgtttcatttctctaggccctataacaacttttattaaa 62
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattctcctactgctaaactgtttcatttctctaggccctataacaacttttattaaa 461
Query: 63 gtatctactgaaaggctgaatcaataagaaagtaggcagtgccattttttaaaaaggaac 122
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gtacctactgaaaggctgagtcaataagaaagtaggcagtgccattttttaaaaaggaac 401
Query: 123 aatcccattctagcaagaaccgtcaagggctaagtaaagcaacgccgtgaggacagggct 182
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agtcgcattctagcaagaaccgtcaagggctaagtaaagcaacgccgtgaggacagggct 341
Query: 183 gtcaggacagtgtgaaggagacagtttttaggctccagaatgacagaaaagtgctacagc 242
|||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 340 gtcagg-cagtgtgaaggacacagtctttaggctccagaatgacagaaaagtgctacagc 282
Query: 243 ttgagaaagcacatggcatgggacagaggtgacaatgatcacccagacagcagacactga 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 281 ttgagaaagcacatggcatgggacagaggtgacaatgaacacccagacagcagacactga 222
Query: 303 gggagtttgtaaccaaagc 321
|||||||||||||||||||
Sbjct: 221 gggagtttgtaaccaaagc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_m20.g1 MSMg01no150_m20.g1 CHROMAT_FILE:
MSMg01no150_m20.g1 PHD_FILE: MSMg01no150_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:27 2005
(213 letters)
>mm_chr6_29862155_29862767
Length = 613
Score = 381 bits (197), Expect = e-110
Identities = 209/213 (98%)
Strand = Plus / Plus
Query: 1 agagatgagaggtatgtgggcaaaaaataacaaggatacctgccgtaggatgaagatgtg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagatgagagatatgtgggcaaaaaataacaaggatacctgccgtaggatgaagatgtg 260
Query: 61 aaaagctgatgcagttaccagcaggtgtgttggagtgaccatcaccctgagagtcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagctgatgcagttaccagcaggtgtgttggagtgaccatcaccctgagagtcttgtt 320
Query: 121 ttacactgagacactgctaacaagtaccttgtctctccccgaacaccacgccttgaccca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacactgagacactgctaacaaataccttgtctctccccgaacaccacgccttgaccca 380
Query: 181 cagttggttatgtataaggagcacacctctgaa 213
||| ||| |||||||||||||||||||||||||
Sbjct: 381 cagctggctatgtataaggagcacacctctgaa 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
