Query= MSMg01no151_i01.b1 MSMg01no151_i01.b1 CHROMAT_FILE:
MSMg01no151_i01.b1 PHD_FILE: MSMg01no151_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:19 2005
(332 letters)
>mm_chr6_18102862_18103593
Length = 732
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%)
Strand = Plus / Minus
Query: 4 ggaattccaccccaccatccttcaagttagatgaactgcatgccctcaattctaatgggg 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 530 ggaattccaccccaccatccttcaagttagaggaactgcatgccctcaattctaatgggg 471
Query: 64 aacagaaaccttgaacctttttgcacctgccttgtgctcagcactgtgggaacccagata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aacagaaaccttgaacctttttgcacctgccttgtgctcagcactgtgggaacccagata 411
Query: 124 ctgacagctccctggaggagagccagagacatggtagaacatccagtcccgtgctacagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctgacagctccctggaggagagccagagacatggtagaacatccagtcccgtgctacagg 351
Query: 184 ctcatcgccagccatagagctagccacagctgcgattgcactgctatgttttcaagacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctcatcgccagccatagagctagccacagctgcgattgcactgctatgttttcaagacct 291
Query: 244 gatttgaccatgactcttgctgtcttttagaattcttatcatgcttgctttcaagaaaat 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gatttgaccacgactcttgctgtcttttagaattcttatcatgcttgctttcaagaaaat 231
Query: 304 gacaatgagaaatcacatgaaagatca 330
|||||||||||||||||||||||||||
Sbjct: 230 gacaatgagaaatcacatgaaagatca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_i01.g1 MSMg01no151_i01.g1 CHROMAT_FILE:
MSMg01no151_i01.g1 PHD_FILE: MSMg01no151_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:19 2005
(129 letters)
>mm_chr6_17972501_17973029
Length = 529
Score = 213 bits (110), Expect = 4e-60
Identities = 125/130 (96%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 1 tatcaatgctccataccagtattcaagatgctattgctat-tcgggatgaacaaactggc 59
|||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 201 tatcaatgctccatacaagtattcaagatgctattgctatat-gggatgaacaaactggc 259
Query: 60 aggtgatacctcttgcctggatgctacactatccagaaggaccataagatacttaactca 119
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 260 aggtgatacctcttgcctggatgctacactatgcagaaggaccataagatacttgactca 319
Query: 120 gtacactgct 129
||||||||||
Sbjct: 320 gtacactgct 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
