Query= MSMg01no151_j04.b1 MSMg01no151_j04.b1 CHROMAT_FILE:
MSMg01no151_j04.b1 PHD_FILE: MSMg01no151_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(588 letters)
>mm_chr6_117269562_117270548
Length = 987
Score = 1050 bits (543), Expect = 0.0
Identities = 573/583 (98%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 6 gaattcaactcctctcacattgcccactgtgctatggttgttctaaaagacgaagaaaaa 65
||||||||||||||| | ||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 787 gaattcaactcctctgagattgctcactgtgctatgattgttctaaaagacgaag-aaaa 729
Query: 66 aaaatcatggatttaacctgtacctcaccccacacatatgcacgtgctaggtgggtataa 125
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aaaattatggatttaacctgtacctcaccccacacatatgcacgtgctaggtgggtataa 669
Query: 126 caggagtttcagaagcaaaccagaggccgagctgattcatgcagaagtgggaaagaatgg 185
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 668 caggagtttcagaagcaaaccagaggccgagctgattcaggcagaagtgggaaagaatgg 609
Query: 186 gctccttcaactctaccctccttcagtgagtgctgagctcagctcatttgtacttttatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gctccttcaactctaccctccttcagtgagtgctgagctcagctcatttgtacttttatt 549
Query: 246 tatctgtgagagaggagaagggacattttgaaatatttttataagaggctctgtgacttt 305
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 548 tatctgtgagagaggagaagggccactttgaaatatttttataagaggctctgtgacttt 489
Query: 306 gcaaccttcagtacatatctgccagggctggtcaccatgagccctgtgttaagctaatag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcaaccttcagtacatatctgccagggctggtcaccatgagccctgtgttaagctaatag 429
Query: 366 tccatcaagctccctggcagaacattcaggatacaatgtcaacccatggcaacctgagaa 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 428 tccatcaagctccctggcagaacattcaggatacaatgtcaacccatggcaacccgagaa 369
Query: 426 atggagaaacatcagcacagtcaactgatctcttcattttgctcaagacaagagaccttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atggagaaacatcagcacagtcaactgatctcttcattttgctcaagacaagagaccttt 309
Query: 486 tccgagaattgcaaatggggagggagtgacattggacaaaaggaggggtgtgtgttgcaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tccgagaattgcaaatggggagggagtgacattggacaaaaggaggggtgtgtgttgcaa 249
Query: 546 gatgggaaagtgtttgcaagtcccactggagatcctaccagct 588
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gatgggaaagtgtttgcaagtcccactggagatcctaccagct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 987
Length adjustment: 10
Effective length of query: 578
Effective length of database: 977
Effective search space: 564706
Effective search space used: 564706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_j04.g1 MSMg01no151_j04.g1 CHROMAT_FILE:
MSMg01no151_j04.g1 PHD_FILE: MSMg01no151_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(574 letters)
>mm_chr6_117160759_117161732
Length = 974
Score = 1094 bits (566), Expect = 0.0
Identities = 572/574 (99%)
Strand = Plus / Plus
Query: 1 ctaagagaaggctggaggtgttgcttggtggcagagccagagtttggcatgtgtgagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagagaaggctggaggtgttgcttggtggcagagccagagtttggcatgtgtgagcca 260
Query: 61 ctaagttcaatacagtgccccatagtcaaactcatgggagtctgtgaagaaggaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaagttcaatacagtgccccatagtcaaactcatgggagtctgtgaagaaggaaagaag 320
Query: 121 tagaaactttggtaattacaacatcttttaatttttctcttaagaaaatgtatcagtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaaactttggtaattacaacatcttttaatttttctcttaagaaaatgtatcagtgca 380
Query: 181 tctttttttttaattagatattttcttcatttacatttcaaatgctatgccctttcctac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttttttttaattagatattttcttcatttacatttcaaatgctatgccctttcctac 440
Query: 241 tttcctctctgaaagttgcctataccctccccctgccctgctccccaacccacccactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcctctctgaaagttgcctataccctccccctgccctgctccccaacccacccactcc 500
Query: 301 cacttcatggccctggcattcccctgtactggggcagataatcttcgcaagaccaagggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacttcatggccctggcattcccctgtactggggcagataatcttcgcaagaccaagggc 560
Query: 361 ctctcctcccattgatggcctactaggccatcctctgctacatatgcaactagagacaaa 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttcctcccattgatggcctactaggccatcctctgctacatatgcaactagagacaaa 620
Query: 421 agccctgggagtactgattagttcatattgctgttccacctatagggttgcagacccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agccctgggagtactgattagttcatattgctgttccacctatagggttgcagacccctt 680
Query: 481 cggctcttgggtactttctctagctctttcattggggaccctgtgttccatccaatagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cggctcttgggtactttctctagctctttcattggggaccctgtgttccatccaatagat 740
Query: 541 gactgtgagcatccacttctgtattttccaggca 574
||||||||||||||||||||||||||||||||||
Sbjct: 741 gactgtgagcatccacttctgtattttccaggca 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
