CAAAATTTGCGGCGCTATACGACTCCTATATCCAGAAATCCGCGGAATTC
TCTTTAGTTCTTTTCCCATTTTTTAATAGGGTTATTTGTTTCACTGGAGT
CTAACATCTTGAGTTCTTTGTATATATTGGATATTAGCCCTCTATTGGAT
GTAGGATTGGTAAAGGTCTTGTCCCAATCTGTTGGTTGCTGTTTTGTCCT
ATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGTAATTTAATGAAGTCCC
TTTTGTGGCTTCTTGATCTTAAAACATAAGTCCTTGGTGTTCTGTTCAGG
AATTTCTTCCTGTGTTCAAAGTTTTCCTGCACTTTCTCTTCTATTAGATT
CAGTGTATCTGGTTTTATGTGGAGGACCTTGATCCATTAGGACTTGAGCT
TTGTACAGAGACATAAGAGTGGATCAATTTGCTTTCTTCTAAGTATTGAT
CATCAGTTGAACAAGCACCAGTTTTTGAAAGTTTTGTCTTTTTTCCACTG
GATGGTTTTAGCCCTTTTATCAAACATCAAGTGACCATAGGTGTGTGGAT
TCATTTCTGGGTCTTCAATTCTATTCCATTGATCTACCTGCCTGTCACTG
TACCAATACCATGCAGTTTTTATCACAATTTCTCTGTCATACAGGTTTTG
GTCAGGTATGGCAATTCCCACAGAAGTTATTTTATTGTTGAGAA

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACTATATAGACAAGGCAAGCCTTGAACTC
ATGGAGATACACCTGACCCTGTCTCCTGAGTACTGGGATGAAAGGCATAC
TTCACCATTTACCATTCTGCATTTTATCCAAGAGAATGTACTGTTTTTGT
AGACCATCAAGATTATTATTATTATTAATTATTATTATTATTACTTGTTT
TTTGCATTTAGCATATTTAAATTAAAATAGAATTAAATCACTTTCTGCCG
TCCCTCAAGGTACTCTCCCTTAAACCTTATCCTATTCCACAAATGGCAGT
ATCAATAGACATGGTAACTTGAAGAAAAGTATCATGAGGTCACACCATGA
TTGATTGACATTGTTTTCCTTTATTGCTTATCCTGGTAAATAATAAGCAA
ACAACAGAATAGGGACATTGTCCCAACCTTAGTGTGCCTATAATATTTAC
AATGCCCTCAAATTGAAATTATATACATGAGAAACACACATACACACATA
TGCATGCACACACAAACACACTAGAAGCACTAGACTACAAAAGGTATCAT
TGCATATATTATATTAGAACACTTTCCTATATTTAAATTAAATTGTATGT
TTGAAGAATGTTTATTGAATTAAGATATTAGATTTCCTTTTAAAG

Query= MSMg01no153_g02.g1 MSMg01no153_g02.g1 CHROMAT_FILE:
MSMg01no153_g02.g1 PHD_FILE: MSMg01no153_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:44 2005
         (624 letters)



>mm_chr6_12956648_12957671
          Length = 1024

 Score = 1152 bits (596), Expect = 0.0
 Identities = 616/624 (98%), Gaps = 3/624 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actatatagacaaggcaagccttgaactcatggagatacacctgaccctgtctcctgagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 actatatagacaaggcaagccttgaactcatggagatacacctgaccctgtctcctgagt 775

                                                                       
Query: 61  actgggatgaaaggcatacttcaccatttaccattctgcattttatccaagagaatgtac 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 774 actgggatgaaaggcatacttcaccatttgccattctgcattttatccaagagaatgtac 715

                                                                       
Query: 121 tgtttttgtagaccatcaagattattattattattaattattattattattacttgtttt 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tatttttgtagaccatcaagattattattattattaattattattattattacttgtttt 655

                                                                       
Query: 181 ttgcatttagcatatttaaattaaaatagaattaaatcactttctgccgtccctcaaggt 240
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 654 ttgcatttagcatatttaaattaaaatagaattaaatcactttctgccatccctcaaggt 595

                                                                       
Query: 241 actctcccttaaaccttatcctattccacaaatggcagtatcaatagacatggtaacttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 actctcccttaaaccttatcctattccacaaatggcagtatcaatagacatggtaacttg 535

                                                                       
Query: 301 aagaaaagtatcatgaggtcacaccatgattgattgacattgttttcctttattgcttat 360
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aagaaaagtatcatgaggtcataccatgattgattgacattgttttcctttattgcttat 475

                                                                       
Query: 361 cctggtaaataataagcaaacaacagaatagggacattgtcccaaccttagtgtgcctat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cctggtaaataataagcaaacaacagaatagggacattgtcccaaccttagtgtgcctat 415

                                                                       
Query: 421 aatatttacaatgccctcaaattgaaattatatacatgagaaacacacatacacacatat 480
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 414 aatatttacaatgccctcaaattgaaattatacacatgagaaacacacatacacacatat 355

                                                                       
Query: 481 gcatgcacacacaaacacactagaagcactagactacaaaaggtatcattgcatatatta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcatgcacacacaaacacactagaagcactagactacaaaaggtatcattgcatatatta 295

                                                                       
Query: 541 tattagaacactttcctatatttaaattaaattgtatgtttgaagaatgtttattgaatt 600
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 294 tattagaacactttcctatatttaaattaaattgtatgttt---gaatgtttattgaatt 238

                                   
Query: 601 aagatattagatttccttttaaag 624
           ||||||||||||||||||||||||
Sbjct: 237 aagatattagatttccttttaaag 214


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)