Query= MSMg01no154_d22.b1 MSMg01no154_d22.b1 CHROMAT_FILE:
MSMg01no154_d22.b1 PHD_FILE: MSMg01no154_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:49 2005
(537 letters)
>mm_chr6_140312678_140313614
Length = 937
Score = 961 bits (497), Expect = 0.0
Identities = 529/551 (96%), Gaps = 18/551 (3%)
Strand = Plus / Plus
Query: 5 gaattcaatcccatgccccacatggtagaaggatcaaacagacaacttgcatgcatgcat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcccaggccccacatggtagaaggatcaaacagacaacttgcatgcatgcat 264
Query: 65 ccaataaatacatgtgggtttgtttttaaaataaatcatttttaaaggaagaacagatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaataaatacatgtgggtttgtttttaaaataaatcatttttaaaggaagaacagatat 324
Query: 125 gatggtacatgcctttaaatccagcacccaagcagtagagacaggtgagttcaaagccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggtacatgcctttaaatccagcacccaagcagtagagacaggtgagttcaaagccag 384
Query: 185 cctggtttgcagagcaagttctaggccagtcaggggaaacatgaagagactctctctctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctggtttgcagagcaagttctaggccagtcaggggaaacatgaagagactctctctctc 444
Query: 245 tctaaagaaaaagaggaaaagaaataagaagaggaggagaaggagaaggagggtacaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctaaagaaaaagaggaaaagaaataagaagaggaggagaaggagaaggagggtacaaac 504
Query: 305 taatcctaggcaatatttacacttgtgtgtgtgtgt------------------gtgtgt 346
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 taatcctaggcaatatttacacttgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgt 564
Query: 347 gtgtactagagtacagtatcctcagaggccagaagagagtgtctgtcagatcctccaaag 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtactagagtacagtatcctcagaggccagaagagagtgtctgtcagatcctccaaag 624
Query: 407 ctgtagctactggcacctgcaagggactttatgtccaaagtcagacataaaaagtgctct 466
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgtagctacaggcacctgtaagggactttatgtccaaagtcagacataaaaagtgctct 684
Query: 467 taactactggttcacttctctacctgcacctggcttttatttttgcgatgtatttcatca 526
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 taactactggttcacttctctacctgcacctggcttttatttttgtgatgtatttcatca 744
Query: 527 tcctacccaac 537
|||||||||||
Sbjct: 745 tcctacccaac 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_d22.g1 MSMg01no154_d22.g1 CHROMAT_FILE:
MSMg01no154_d22.g1 PHD_FILE: MSMg01no154_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:49 2005
(268 letters)
>mm_chr6_140464310_140464977
Length = 668
Score = 511 bits (264), Expect = e-149
Identities = 267/268 (99%)
Strand = Plus / Minus
Query: 1 tgataaatttttaaagggaatagaaatattcataacttttccatatacaccacttcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 468 tgataaatttttaaagggaatagaaatattcataacttttccatatacagcacttcctaa 409
Query: 61 attttctagctttgggcagaatcttaggtggaagctgaaaaattcaataagttcagggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 attttctagctttgggcagaatcttaggtggaagctgaaaaattcaataagttcagggaa 349
Query: 121 aaaggaactgactcttaaagctgtcaagctaaataaaatgaacttgaaaccctacttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaaggaactgactcttaaagctgtcaagctaaataaaatgaacttgaaaccctacttcta 289
Query: 181 tgcttccaaatatgtagtaaaatatactatactgctaaggcagcaacctagtccttaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tgcttccaaatatgtagtaaaatatactatactgctaaggcagcaacctagtccttaaat 229
Query: 241 ttggaatcttataacataaaatgttatt 268
||||||||||||||||||||||||||||
Sbjct: 228 ttggaatcttataacataaaatgttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
