Query= MSMg01no155_e19.b1 MSMg01no155_e19.b1 CHROMAT_FILE:
MSMg01no155_e19.b1 PHD_FILE: MSMg01no155_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:10 2005
(499 letters)
>mm_chr6_17975483_17976389
Length = 907
Score = 868 bits (449), Expect = 0.0
Identities = 487/503 (96%), Gaps = 8/503 (1%)
Strand = Plus / Minus
Query: 5 gaattctctctgttcc-cagctagatgtaccgtttgatgatcagggaagataagatgaaa 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattctctctgttccaaagctagatgtaccgtttgatgatcagggaagataagatgaaa 648
Query: 64 ggtagattgaccgggcgatgtaatcattgctactaaaaccccccatgattatggggaagt 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ggtagattgaccgggcgacgtaatcattgctactaaaaccccccatgattatggggaagt 588
Query: 124 agaggatgctggccacatgtgccccagagttccagagtaaaacagaataacttttttaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 agaggatgctggccacatgtgccccagagttccagagtaaaacagaataacttttttaaa 528
Query: 184 catttgggatttattctttcacaggtagagggaaaacccaaacagtcttttaaggagata 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catttggaatttattctttcacaggtagagggaaaacccaaacagtcttttaaggagata 468
Query: 244 ctctgaaactctagaataggtttaaaaacaaagggagttcatccttgcaagtttcaagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctctgaaactctagaataggtttaaaaacaaagggagttcatccttgcaagtttcaagag 408
Query: 304 gaaaagacaaaaggaaaacaagacagtagatagaagattaaaaaaaaaa---gtggtttt 360
|||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 407 gaaaaggcaaaaggaaaacaagacagtagatagaagataaaaaaaaaaaaaagtggtttt 348
Query: 361 gtttttgttgttcgcttgttt----tgtaagggttagccagtccatgaccctcaagaaac 416
|||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 347 gtttttgttgtttgtttgtttgttttgtaagggttagccagtccatgaccctcaagaaac 288
Query: 417 tctagttcagggttttatcttcccaggtaaaatcctcccaaacgaagcaaaccctgcctg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tctagttcagggttttatcttcccaggtaaaatcctcccaaacgaagcaaaccctgcctg 228
Query: 477 cccacccagttgacattgctgat 499
||||||| |||||||||||||||
Sbjct: 227 cccaccctgttgacattgctgat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 907
Length adjustment: 10
Effective length of query: 489
Effective length of database: 897
Effective search space: 438633
Effective search space used: 438633
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_e19.g1 MSMg01no155_e19.g1 CHROMAT_FILE:
MSMg01no155_e19.g1 PHD_FILE: MSMg01no155_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:11 2005
(428 letters)
>mm_chr6_17826961_17827788
Length = 828
Score = 735 bits (380), Expect = 0.0
Identities = 412/428 (96%), Gaps = 10/428 (2%)
Strand = Plus / Plus
Query: 1 cttcttgcagtcgtacaatccttacagaggtcctgtggtgactagtcctacgactggcct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttgcagttgtacaatccttacagaggtcctgtggtgactagtcctacgactggcct 260
Query: 61 cttctcctaaaatcagccccaaggacagagaccaaacatcagctcttacatatctgagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctcctaaaatcagccccaaggacagagaccaaacatcagctcttacatatctgagc- 319
Query: 121 taagaaattttttcttagtgtaagaaaaaatttcagtatattgagtcaaaacttccaggg 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 --agc-------tcttagtgtaagaaaaaatttcagtatattgagtcaaaacttccaggg 370
Query: 181 gctacttttggctctcccggcatgtaggtatgagagactgtaaacagtagaagaatatat 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctacttttggctcttccggcatgtaggtatgagagactgtaaacagtagaagaatatat 430
Query: 241 ttaggaaaggcctgacccagacctgggacatcaccacatagtatgtctctgcacaaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttaggaaaggcctgacccagacctgggacatcaccacatagtatgtctctgcacaaagga 490
Query: 301 actgcattttaaaaattttaagtatggtgtatctactctgactcagtcgctgatcgagaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 491 actgcattttaaaaattttaagtatggtgtatctactctgactcagtcgctgattgagaa 550
Query: 361 cgaagcaacagggtggtctcactgctcacagggaagctgggacaaggactctggccagcc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caaagcaacagggtggtctcactgctcacagggaagctgggacaaggactctggccagcc 610
Query: 421 gagctgga 428
||||||||
Sbjct: 611 gagctgga 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
