Query= MSMg01no155_p11.b1 MSMg01no155_p11.b1 CHROMAT_FILE:
MSMg01no155_p11.b1 PHD_FILE: MSMg01no155_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:59 2005
(305 letters)
>mm_chr6_51809185_51809888
Length = 704
Score = 574 bits (297), Expect = e-168
Identities = 303/305 (99%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 1 tatctctactgcttgtatctaatgtaacccatcactgcctgctcaatctgacatcagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatctctactgcttgtatctaatgtaacccatcactgcctgctcaatctgacatcagagt 260
Query: 61 gctttagtgcgtgactacatcgaatggcagctgaggcaggaatgttcacccaaaggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttagtgcgtgactacatcgaatggcagctgaggcaggaatgttcacccaaaggaagg 320
Query: 121 tggctccgagcaggcactcaggcgttccatgttccaaggcacttgcagacagacacaaga 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctccgagcaggcactcaggcattccatgttccaaggcacttgcagacagacacaaga 380
Query: 181 cttctctgcaggcaaaaagagaaagctacatttaagttttcttcttcagtagaaatgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctctgcaggcaaaaagagaaagctacatttaagttttcttcttcagtagaaatgctc 440
Query: 241 tttatttatcctgcttagaaagaaaaaaacatttttactcaaacaaaagtgaaaatttgc 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tttatttatcctgcttagaaagaaaaaa-catttttactcaaacaaaagtgaaaatttgc 499
Query: 301 tcaac 305
|||||
Sbjct: 500 tcaac 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 704
Length adjustment: 9
Effective length of query: 296
Effective length of database: 695
Effective search space: 205720
Effective search space used: 205720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_p11.g1 MSMg01no155_p11.g1 CHROMAT_FILE:
MSMg01no155_p11.g1 PHD_FILE: MSMg01no155_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:59 2005
(240 letters)
>mm_chr6_51946233_51946873
Length = 641
Score = 408 bits (211), Expect = e-118
Identities = 230/241 (95%), Gaps = 9/241 (3%)
Strand = Plus / Minus
Query: 1 cttttgaaaatgtaactccttttatc-aacataatcctatgacttttaatggaaactgta 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 401 cttttgaaaatgtaactccttttatcaaacataatcctatgacttttaatggaaactgta 342
Query: 60 ttcctgggcttttcctagtcagcccctcattacaggtttcagacgactgcataggtaagg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 341 ttcctgggcttttcctagtcagcccctcattacaggtttcagacgactgcataagtaagg 282
Query: 120 ggagtacctgaattattttctcagttgctctttccacttttcagttcttgttattctcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggagtacctgaattattttctcagttgctctttccacttttcagttcttgttattctcat 222
Query: 180 tatcttattggtcttgcttagntttttttttttttttttttttaacttccagaaaccttg 239
||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 221 tatcttattggtcttgcttag--------ttttttttttttttaacttctagaaaccttg 170
Query: 240 g 240
|
Sbjct: 169 g 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
