Query= MSMg01no156_l11.b1 MSMg01no156_l11.b1 CHROMAT_FILE:
MSMg01no156_l11.b1 PHD_FILE: MSMg01no156_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:54 2005
(276 letters)
>mm_chr6_111834922_111835597
Length = 676
Score = 493 bits (255), Expect = e-144
Identities = 270/277 (97%), Gaps = 5/277 (1%)
Strand = Plus / Minus
Query: 5 gaattcttgaaactaagtcttttgaattttaaaataagaagaggtaatttgtaaacttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaattcttgaaactaagtcttttgaattttaaaataagaagaggtaatttgtaaacttgt 288
Query: 65 tcattttgttactttaataccatcagaacattctggtaggtaatatgtcttcagttaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcattttgttactttaataccatcagaacattctggtaggtaatatgtcttcagttaact 228
Query: 125 cacatatctttgtccccagtatggtgtgtgtgtgtg----tgtgtgtgtgtaaataacat 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 227 cacatatctttgtccccagtatggtgtgtgtgtgtgcgtgtgtgtgtgtgtaaataacat 168
Query: 181 atatcaatgcatgtatatcaatagagctgcatatatgtatagataagtatacatatgttc 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atatcaatgtatgtatatcaatagagctgcatatatgtatagataagtatacatatgttc 108
Query: 241 atatg-cattgtagtaaattaattgggttaacttgaa 276
||||| ||||| |||||||||||||||||||||||||
Sbjct: 107 atatggcattgcagtaaattaattgggttaacttgaa 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no156_l11.g1 MSMg01no156_l11.g1 CHROMAT_FILE:
MSMg01no156_l11.g1 PHD_FILE: MSMg01no156_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:55 2005
(287 letters)
>mm_chr6_111745152_111745839
Length = 688
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 tctacacaaagcaaacaatgaaatagcacagtatctcttcatagataggaagaatgacac 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tctacacaaagcaaacaatgaaatagcacagtatctcttcatagatagcaagaatgacac 260
Query: 61 aagcgaggactggtctcttcacattttgaacattctatcccttcctgacattacggcttg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcgaggactggcctcttcacattttgaacattctatcccttcctgacattacggcttg 320
Query: 121 tagagactgagcagactacagctcggcttcctttaatgtgtgacagttctatatgtttgt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagactgagcagactacagctctgcttcctttaatgtgtgacagttctatatgtttgt 380
Query: 181 ctaatgaatttcagtcatgttcatccccg-tgccctccttcatcccccgcttctaccctc 239
|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 381 ataatgaatttcagtcatgttcatccccgatgccctccttcatcccctgcttctaccctc 440
Query: 240 tatctcttgtttgtgtatggatccctgagattacgaagacctatctg 286
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tatctcttgtttgtgtatggatccctgagattactaagacctatctg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
