Query= MSMg01no161_h05.b1 MSMg01no161_h05.b1 CHROMAT_FILE:
MSMg01no161_h05.b1 PHD_FILE: MSMg01no161_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:04 2005
(368 letters)
>mm_chr6_136342639_136343406
Length = 768
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%), Gaps = 1/354 (0%)
Strand = Plus / Plus
Query: 16 gaattca-gagataccgaactactggaggaaggaggagggaaggggcttcccaccgtaaa 74
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattcaagagataccgaactactggaggaaggaggagggaaggggcttcccaccgtaaa 274
Query: 75 tctctcggtttctttgtttaaccccgtttgtttatttagggcagcatgtgccaccatgtc 134
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 275 tctctcggtttctttgtttaatcgtgtttgtttatttagggcagcatgtgccaccatgtc 334
Query: 135 catggagagcccggaggacagcttgtaggagtcatttctctttttcccctggatcaataa 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 catggagagcccggaggacagcttgtaggagtcatttctctttttcccctggatcaataa 394
Query: 195 gctcaccagatttggtcacagagcctgtacccactgagtcaccttgtggaccccaaatct 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gctcaccagatttggtcacagagcctgtacccactgagtcaccttgtggaccccaaatct 454
Query: 255 tttcattataaaccactgaacttagaagagtcctcatgcaggaaaaagaaatctatgtat 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tttcattataaaccactgaacttagaagagtcctcatgcaggaaaaagaaatctatgtat 514
Query: 315 taatatccatattatagagcctgagagatggttcagcagttcaaagcacctgcc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 taatatccatattatagagcctgagagatggttcagcagttcaaagcacctgcc 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_h05.g1 MSMg01no161_h05.g1 CHROMAT_FILE:
MSMg01no161_h05.g1 PHD_FILE: MSMg01no161_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:04 2005
(380 letters)
>mm_chr6_136521294_136522073
Length = 780
Score = 723 bits (374), Expect = 0.0
Identities = 377/378 (99%)
Strand = Plus / Minus
Query: 1 tttgttcagctctgagccccattttttattggggttatttgattttctggagtccacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tttgttcagctctgagccccattttttattggggttatttgattttctggagtccacctt 658
Query: 61 cttgagttctttatatatattggatattagtcccctatctgatttaggataggtaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cttgagttctttatatatattggatattagtcccctatctgatttaggataggtaaagat 598
Query: 121 cctttcccattctcttggtcactccatgttttaaagtaaacatagacatcaagtgtggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cctttcccattctcttggtcactccatgttttaaagtaaacatagacatcaagtgtggcc 538
Query: 181 cacactactgaagcaatcattcttcagtctcacaaacttcttagttcagaatgaggtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cacactactgaagcaatcattcttcagtctcacaaacttcttagttcagaatgaggtctg 478
Query: 241 gccagcggcagcaacgctgtgatccatttgagatccactcagcttcagacgctttttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gccagcggcagcaacgctgtgatccatttgagatccactcagcttcagacgctttttctt 418
Query: 301 cattttctgtggaatcgaaagctctcagttttctttttttcaagccaaccttaaaaatgg 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 417 cattttctgtggaatcgaaagctctcaggtttctttttttcaagccaaccttaaaaatgg 358
Query: 361 ctttgtttggggaacatg 378
||||||||||||||||||
Sbjct: 357 ctttgtttggggaacatg 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
