Query= MSMg01no161_l04.b1 MSMg01no161_l04.b1 CHROMAT_FILE:
MSMg01no161_l04.b1 PHD_FILE: MSMg01no161_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:36 2005
(412 letters)
>mm_chr6_18272609_18273420
Length = 812
Score = 688 bits (356), Expect = 0.0
Identities = 393/406 (96%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctagctctactctctatgactcttagaacacaaaccttccttttagatataat 63
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 204 ggaattcctagctctactctctatgattcttagaacacaaacattccttttagatataat 263
Query: 64 ctctttgagaatcccagttgaattacagcacaagacattaagttgggtctttaaactcaa 123
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||
Sbjct: 264 ctctttgagaatcccagttgaattagagcacaagacattaagttgggtctctaaacccaa 323
Query: 124 ctagattttttttttgtcaatttgatgcaagatagaattatctaggaaggggaaccccag 183
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 ctagattattttt--gtcaatttgatgcaagatagaattatctaggaaggggaacctcag 381
Query: 184 ttaacaaaatacctccaacaggttcactggaggtgaatctggagttcattttcttgattg 243
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 382 ttaacaaaatacctccaacaggttcactgtaggtgaatctggagttcattttcttgattg 441
Query: 244 aaattcatgtgggaggatctagatcactgtgagctacaacacccagattggtagtcctgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaattcatgtgggaggatctagatcactgtgagctacaacacccagattggtagtcctgg 501
Query: 304 atggtgcaagaaattgggctgagcaagccatggggaacaagccaacagcatctcctcctc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 502 atggtgcaagaaattgggctgagcaagccatggggaacaagccaacagcatctcctccac 561
Query: 364 agcctctattttagttcctgctttgagtccctcaaggacgaactat 409
|| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 562 agtctctattttagttcctgctttgagtccctcaaggatgaactat 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_l04.g1 MSMg01no161_l04.g1 CHROMAT_FILE:
MSMg01no161_l04.g1 PHD_FILE: MSMg01no161_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:36 2005
(187 letters)
>mm_chr6_18353763_18354349
Length = 587
Score = 337 bits (174), Expect = 3e-97
Identities = 183/186 (98%)
Strand = Plus / Minus
Query: 2 aagaaaatatgatacatttgttatatacttagtagatgtaggtgatacaagtgtttttac 61
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagaaaatatgatacatttgttacatacttagtagatgtaggtgatacaagtgtttttac 328
Query: 62 ttggtttgtttatttataacatccctacaataagtaaggcaaagagaggttaaaagaatc 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 ttggtttgtttatttataacatccctacaataagtaaggcaaagagaggttaaaaggatc 268
Query: 122 ttatgatcaaagcagcatacatagtcaccgatggaacccaaatgttggaagtgcctaagg 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 267 ttatgatcaaagcagcatacatagtcaccgatggaccccaaatgttggaagtgcctaagg 208
Query: 182 taccct 187
||||||
Sbjct: 207 taccct 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
