Query= MSMg01no163_i03.b1 MSMg01no163_i03.b1 CHROMAT_FILE:
MSMg01no163_i03.b1 PHD_FILE: MSMg01no163_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:07 2005
(311 letters)
>mm_chr6_51117558_51118268
Length = 711
Score = 516 bits (267), Expect = e-151
Identities = 297/307 (96%), Gaps = 7/307 (2%)
Strand = Plus / Plus
Query: 8 ttccaggatagcccgggctatacagaaaaaccctggtctcggaa-aaacaaacaaacaaa 66
||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 209 ttccaggatagccggggctatacagaaaaaccctg-tctcggaacaaacaaacaaacaaa 267
Query: 67 acaaaaacaaaa-caaaa-caaacaaacaaacaaacaaaacagaaccaaaaagtaggaag 124
||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 268 -caaaa-caaaaacaaaaacaaacaaacaaacaaacaaa-cagaaccaaaaagtaggaag 324
Query: 125 ggatgcatgagtgtgctttccacctcagttttgtagtctgatggttccagcccagacccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatgcatgagtgtgctttccacctcagttttgtagtctgatggttccagcccagacccc 384
Query: 185 actaaattgtgtgaccttcgtagtctaagaatcaaagtttggtgcttaagattagcattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actaaattgtgtgaccttcgtagtctaagaatcaaagtttggtgcttaagattagcattt 444
Query: 245 ggcacatttcgtgtgttctgtcacttggacacccgctgctcttccttatgcttgtgaccc 304
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 ggcacatttcctgtgttctgtcacttggacatccgctgctcttccttatgcttgtgaccc 504
Query: 305 ttcttcc 311
|||||||
Sbjct: 505 ttcttcc 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_i03.g1 MSMg01no163_i03.g1 CHROMAT_FILE:
MSMg01no163_i03.g1 PHD_FILE: MSMg01no163_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:07 2005
(283 letters)
>mm_chr6_51281446_51282128
Length = 683
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 ttgtgaataaggccaagggctcgaaggctgcagtgttgggcttatgaaggcagaggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgtgaataaggccaagggctcgaaggctgcagtgttgggcttatgaaggcagaggaaga 423
Query: 61 gctttctgagctatgggagtcacagtctcctcaacagctcgccgcacctgagcagagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctttctgagctatgggagtcacagtctcctcaacagctcgccgcacctgagcagagagc 363
Query: 121 aagggcagagaggccgagagaggctgggctcacagaggcctgggaacattcctctattct 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 362 aagggcagagaggccgagagaggctgggctcacagaggcccgggaacattcctctattct 303
Query: 181 ttttctctaaagctccaacgtgaggggggctccaggctttccaacctcggaagagcaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttttctctaaagctccaacgtgaggggggctccaggctttccaacctcggaagagcaatg 243
Query: 241 ttactaacaaactctgagtaatttaagcccgagaagccagtg 282
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 ttactaacaaactctgagtaatttaagcctgagaagccagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
