Query= MSMg01no164_o05.b1 MSMg01no164_o05.b1 CHROMAT_FILE:
MSMg01no164_o05.b1 PHD_FILE: MSMg01no164_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:51 2005
(316 letters)
>mm_chr6_67062442_67063157
Length = 716
Score = 553 bits (286), Expect = e-162
Identities = 304/310 (98%)
Strand = Plus / Plus
Query: 4 ggaattctttttttgtttggtttggttttgtttttatcgagacagggtttctctgtgtag 63
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 204 ggaattctttttttgtttggtttggtttggtttttgtcgagacagggtttctctgtgtag 263
Query: 64 ctctggctgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctggctgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccacc 323
Query: 124 tgcctctgcctcccgagtgtgtgcaccgccactccctggctagccctggaattctttgag 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 tgcctctgcctcccgagtgtgtgcaccaccactccctggctagccctggaattctttgag 383
Query: 184 tggaggagaaactaacacaagctcttctcagggtcactgccaggaggataaggtggggac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggaggagaaactaacacaagctcttctcagggtcactgccaggaggataaggtggggac 443
Query: 244 ctcatctcctcttctcccacactggttgatctctgtgtgcagagggttaaggacacacga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 ctcatctcctcttctcccacactggttgatctctgtgtgcagagggttaaggagacacga 503
Query: 304 ggaaagcctg 313
||||||||
Sbjct: 504 acaaagcctg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_o05.g1 MSMg01no164_o05.g1 CHROMAT_FILE:
MSMg01no164_o05.g1 PHD_FILE: MSMg01no164_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:51 2005
(300 letters)
>mm_chr6_67175246_67175946
Length = 701
Score = 513 bits (265), Expect = e-150
Identities = 289/297 (97%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 accttctcttcacccctgtttctattagctcaacttcaggctgtggttagctcttgcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 678 accttctcttcacccctgtttctattagctcaacttcaggctgtggttatctcttgcctg 619
Query: 61 aattattattgcaagagcctctaaactggttgtcttatactcagccccagtaccaatcca 120
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 618 aattattattgtaagagcctctaaactggttgtcttatacacagccccagtaccaatcca 559
Query: 121 ttgtccacaagaggaatggtttgatgcctacaagtctaatccggtcatcctttccttgaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 558 ttgtccacaagaggaatggtttgatgcatacaagtctaatccggtcatcctttccttgaa 499
Query: 181 aagaaaatggtttgttcccaagtgctcagagaagaaaatgtaaggtcctctaagccccc- 239
||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 498 aagaaaatgttttgtttccaagtgctcagagaagaaaatgtaaggtcctctaagacccct 439
Query: 240 gtgatctgttgaggtgactccctcagcatcacttctccttgaccctttttgttttac 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgatctgttgaggtgactccctcagcatcacttctccttgaccctttttgttttac 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
