Query= MSMg01no168_a09.b1 MSMg01no168_a09.b1 CHROMAT_FILE:
MSMg01no168_a09.b1 PHD_FILE: MSMg01no168_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:57 2005
(365 letters)
>mm_chr6_54834783_54835548
Length = 766
Score = 534 bits (276), Expect = e-156
Identities = 294/300 (98%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 16 ggaattcttcctggacaatgtggccatggtatgtacctcactgtccacctgtttcctccc 75
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggaattcttcctggacaatgtggtcatggtatgtacctcactgtccacctgtttcctccc 450
Query: 76 agtgctaagctttaattaaataaacaaatgtggtttaaagtacccagagtattctagtta 135
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 449 agcggtaagctttaattaaataaacaaatgtggtttaaagtacccagagtattctactta 390
Query: 136 ctcaatatctaattgtattcaagaatcccgaagagctgcta-ttttttctcttttgctgt 194
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 389 ctcaatatctaattgtattcaagaatcccgaagagctgctatttttttctcttttgctgt 330
Query: 195 tgttttgggagtggtttttggtgctggggaattaagcccagggctgtgatagttaagtgt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgttttgggagtggtttttggtgctggggaattaagcccagggctgtgatagttaagtgt 270
Query: 255 gcattctaacactggcaagactcttaaacctccatagtgtatctttaaaaat-aattttt 313
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 269 gcattctaacactggcaagactcttaaacctccatagtgtatctttaaaaataaattttt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 766
Length adjustment: 9
Effective length of query: 356
Effective length of database: 757
Effective search space: 269492
Effective search space used: 269492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_a09.g1 MSMg01no168_a09.g1 CHROMAT_FILE:
MSMg01no168_a09.g1 PHD_FILE: MSMg01no168_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:57 2005
(377 letters)
>mm_chr6_54791629_54792405
Length = 777
Score = 710 bits (367), Expect = 0.0
Identities = 373/375 (99%)
Strand = Plus / Plus
Query: 1 attggaacaagaaggaatatactttttaaaaataatggacatattatatgtgtgctttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggaacaagaaggaatatactttttaaaaataatggacatattatatgtgtgctttaa 260
Query: 61 gtcatttgaactttgtaagcatgtatctaaacaataataatgatgataatagtaataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcatttgaactttgtaagcatgtatctaaacaataataatgatgataatagtaataaag 320
Query: 121 ttagatgaagtagaggagcatttagcaaaatgtttttggcttgaagtaaaatcttttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagatgaagtagaggagcatttagcaaaatgtttttggcttgaagtaaaatcttttaaa 380
Query: 181 atgaaagctaacatcctattagatttattaaattctctatcaacaatttatgttcagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaagctaacatcctattagatttattaaattctctatcaacaatttatgttcagtgc 440
Query: 241 caggtttcacacaatgtaaaagagacatggctggaagtaaggaagttcctgaagcagcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggtttcacacaatgtaaaagagacatggctggaagtaaggaagttcctgaagcagcct 500
Query: 301 tctgtggcatgagatacaaacgagtgttttaggtattgtgagctttcactgtttttcagg 360
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtggcatgagatacaaacgagtggattaggtattgtgagctttcactgtttttcagg 560
Query: 361 agaatggttagttat 375
|||||||||||||||
Sbjct: 561 agaatggttagttat 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
