Query= MSMg01no169_b09.b1 MSMg01no169_b09.b1 CHROMAT_FILE:
MSMg01no169_b09.b1 PHD_FILE: MSMg01no169_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:41 2005
(313 letters)
>mm_chr6_18265834_18266546
Length = 713
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 5 gaattctttacttgctcagatcattcagtcagtacttatcaaaaaccacccagggatcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaattctttacttgctcagatcattcagtcagtacttatcaaaaaccacccagggatcca 453
Query: 65 actactgcaggaacaacagagagcagggcatgattccataatcataggagatatggagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 actactgcaggaacaacagagagcagggcatgattccataatcataggagatatggagta 393
Query: 125 gccaagaggtgaattttgattcagtgtaggaaattttgaggagccgaggcatagctatac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gccaagaggtgaattttgattcagtgtaggaaattttgaggagccgaggcatagctatac 333
Query: 185 ctaggaaagtctcttttcccaaagcaggagggtcaggatggagttcagaacaaagtgatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctaggaaagtctcttttcccaaagcaggagggtcaggatggagttcagaacaaagtgatg 273
Query: 245 tgtgaaggaaggcttgaatggtgagaaggtttaggagtagtgctctgcaagggtttccca 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 272 tgtgaaggaaggcttgaatggtgagaaggagcaggagtagtgctctgcaagggtttccca 213
Query: 305 ggtccaga 312
||||||||
Sbjct: 212 ggtccaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_b09.g1 MSMg01no169_b09.g1 CHROMAT_FILE:
MSMg01no169_b09.g1 PHD_FILE: MSMg01no169_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:42 2005
(338 letters)
>mm_chr6_18081979_18082715
Length = 737
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 1 tttaaacattgaactatagggctggagaaaaacttttattttatttgaaaattgtttgag 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tttaaacattgaactatagggctggagaaaaacttttattttatttggaaattgtttgag 260
Query: 61 aaataagtaacagagttgggatagttagttatttaaaagaaaaatgtgatacttgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataagtaacagagttgggatagttagttatttaaaagaaaaatgtgatacttgttttt 320
Query: 121 ttcagtaagaagtatatttgtgaatattatttttattgttttaaattagaaatactttgt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 t-cagtaagaagtatatttgtgaatattatttttattgttttaaattagaaatactttgt 379
Query: 181 gtagacaggtgcttgtctgtttgcactacatgcctgcttggctccatggaggctaaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtagacaggtgcttgtctgtttgcactacatgcctgcttggctccatggaggctaaaaga 439
Query: 241 gagtcagctccctggatctggagttagagattgtgagctgccatgtgagtggtgggggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagtcagctccctggatctggagttagagattgtgagctgccatgtgagtggtgggggct 499
Query: 301 gatctgcatcctatgcaggcacagcaagtgctcctaa 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatctgcatcctatgcaggcacagcaagtgctcctaa 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
