Query= MSMg01no170_a22.b1 MSMg01no170_a22.b1 CHROMAT_FILE:
MSMg01no170_a22.b1 PHD_FILE: MSMg01no170_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:54 2005
(319 letters)
>mm_chr6_95238130_95238848
Length = 719
Score = 536 bits (277), Expect = e-157
Identities = 306/317 (96%), Gaps = 4/317 (1%)
Strand = Plus / Minus
Query: 5 gaattcaacagcacttattaaatacttacatagattt--aaaaaaaaatcggcaacttcc 62
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 367 gaattcaacagcacttattaaatacttacat--atttaaaaaaaaaaatcggcaacttcc 310
Query: 63 ctgataaattctgttggatggagatacttgtggttctctccggggcataccacggatgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 309 ctgataaattctgttggatggagatacttgtggttctctccggggcataccacgggtgtc 250
Query: 123 ctctaaagccaaggacactatgcaagtgagaccaagtgaaactattcttcaagtaagctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctctaaagccaaggacactatgcaagtgagaccaagtgaaactattcttcaagtaagctt 190
Query: 183 ttcattggagagtagctagatttacagggagagttatgaggagtacagtggttcccacat 242
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcattggagattagctagatttacagggagagttatgaggagtacagtggttcccacat 130
Query: 243 gccattcatcatttcctttacaatagaaacatactacgtattcaaggtacattgatcaga 302
| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 129 gtcattcatcatttcctttacaatagaaacatactacgtagccaaggtacattcatcaga 70
Query: 303 aagaagacacgaacgtt 319
||||||||| |||||||
Sbjct: 69 aagaagacatgaacgtt 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_a22.g1 MSMg01no170_a22.g1 CHROMAT_FILE:
MSMg01no170_a22.g1 PHD_FILE: MSMg01no170_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:55 2005
(290 letters)
>mm_chr6_95077013_95077702
Length = 690
Score = 557 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1 aagacaactatgcactcttgaaaagcagaatattcctgggtagagacatccaaactggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagacaactatgcactcttgaaaagcagaatattcctgggtagagacatccaaactggtt 260
Query: 61 aacgtgactttcttttaactacgggtaacaatatgaggcaatatcatttatttagctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacgtgactttcttttaactacgggtaacaatatgaggcaatatcatttatttagctgtg 320
Query: 121 atctctaacacagagaagcactaacctagatcctcagtcttactatttatatctatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctctaacacagagaagcactaacctagatcctcagtcttactatttatatctatttac 380
Query: 181 atatatatttttgtgtactgttttcaagtgtacgagatttaaatgtgctgtcagcagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatatttttgtgtactgttttcaagtgtacgagatttaaatgtgctgtcagcagacg 440
Query: 241 gaagggaaactcggttttcagagcgaacttttagtccgattgttccat 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagggaaactcggttttcagagcgaacttttagtccgattgttccat 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
