Query= MSMg01no170_b09.b1 MSMg01no170_b09.b1 CHROMAT_FILE:
MSMg01no170_b09.b1 PHD_FILE: MSMg01no170_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:57 2005
(307 letters)
>mm_chr6_28813149_28813854
Length = 706
Score = 571 bits (295), Expect = e-167
Identities = 301/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcctcaacagcatgacctctaaacacagatattcccagggcatattgtggaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaattcttcctcaacagcatgacctctaaacacagatattcccagggcatattgtggaga 447
Query: 65 gttcttccattctattactctgagtggccagtatacccacagcccaggcctcactaccaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttcttccattctattactctgagtggccagtatacccacagcccaggcctcactaccaa 387
Query: 125 attcaaccgtaccagggagtgagtccaaccctcactctgtcacctttactaggaagtcct 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 386 attcaaccgtaccagggagtgagtccaaccctcactctgtcacctttactaggaagccct 327
Query: 185 ctcttctcaggtggcagtgagggtcacttcttgggctccaggtactgtcacaatgacctc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 326 ctcttctcaggtggcagtgagggtcacttcttgggctccaggtactgtcacaatga-ctc 268
Query: 245 cactcattctgactctactgactgatactcttccttctttatctgcactgccccacactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cactcattctgactctactgactgatactcttccttctttatctgcactgccccacactt 208
Query: 305 cag 307
|||
Sbjct: 207 cag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 706
Length adjustment: 9
Effective length of query: 298
Effective length of database: 697
Effective search space: 207706
Effective search space used: 207706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_b09.g1 MSMg01no170_b09.g1 CHROMAT_FILE:
MSMg01no170_b09.g1 PHD_FILE: MSMg01no170_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:57 2005
(272 letters)
>mm_chr6_28654664_28655335
Length = 672
Score = 499 bits (258), Expect = e-146
Identities = 266/272 (97%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 1 cttcctctcctgttgctgagcactggcaactgtcccttcaggggacgtctgtaactagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcctctcctgttgctgagcactggcaactgtcccttcaggggacgtctgtaactagga 260
Query: 61 aaagaagctaagagctgcagagcgttaggggaaggaaaagggtgagcagagtgtggagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagaagctaagagctgcagagcgttaggggaaggaaaagggtgagcagagtgtggagtg 320
Query: 121 aatcgggaatccgaggcctcagaaagtctgtggcaggcttaaatcagtctgtaaatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcgggaatccgaggcctcagaaagtctgtggcaggcttaaatcagtctgtaaatgttt 380
Query: 181 gctgatgggacgaagagggcaaggatggcaagtagggaaggatggtacccatggtctctg 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gctgatgggacgaagagggcaaggatggcaagtagggaaggatggt------ggtctctg 434
Query: 241 ttgccctagcaggtacgcaataattctgggaa 272
||||||||||||||||||||||||||||||||
Sbjct: 435 ttgccctagcaggtacgcaataattctgggaa 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
