Query= MSMg01no170_o17.b1 MSMg01no170_o17.b1 CHROMAT_FILE:
MSMg01no170_o17.b1 PHD_FILE: MSMg01no170_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:00 2005
(316 letters)
>mm_chr6_45866564_45867279
Length = 716
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Minus
Query: 5 gaattctctttgtgattctattttttattttctcattctaacaatttatagtaaagttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattctctttgtgattctattttttattttctcattctaacaatttatagtaaagttaa 457
Query: 65 atggatttgccattttgtagcatcaccatgacttcccaagatattccttgctgaggcaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atggatttgccattttgtagcatcaccatgacttcccaagatattccttgctgaggcaga 397
Query: 125 tgcatagaatgtcattctttgtgtgttgtacctcttgtccaccttttctggcctcttatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgcatagaatgtcattctttgtgtgttgtacctcttgtccaccttttctggcctcttatc 337
Query: 185 ctagaatctcaactcattgcttttaatccaggtggtcatacacatcctgaaataggtata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctagaatctcaactcattgcttttaatccaggtggtcatacacatcctgaaataggtata 277
Query: 245 ttcctgaccacacttcccaaatcccagctatataaggtcacctcacagaattctagacta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttcctgaccacacttcccaaatcccagctatataaggtcacctcacagaattctagacta 217
Query: 305 tatccttttagt 316
||||||||||||
Sbjct: 216 tatccttttagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_o17.g1 MSMg01no170_o17.g1 CHROMAT_FILE:
MSMg01no170_o17.g1 PHD_FILE: MSMg01no170_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:00 2005
(300 letters)
>mm_chr6_45692454_45693154
Length = 701
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 cacagcagcacttctgtagcaaaacctgaagcagggcttagtgcagatagtcggataaat 60
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 201 cacagcagcacttcagtagcaaaacctgaagcagggcttagtgcagacagtcagataaat 260
Query: 61 acagcatcatggttcatttttttaaacaaatactcagcaagttcaatttttt-acaggga 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 acagcatcatggttcatttttttaaacaaatactcagcaagttcaatttttttacaggga 320
Query: 120 aaacaatgggtaaagggcattaaaagagacactgattttattctcataaatattatagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaatgggtaaagggcattaaaagagacactgattttattctcataaatattatagct 380
Query: 180 accagaatgtaaacttgtgcttgtgataataaactatgcttcaaaaaggcaatgtagagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagaatgtaaacttgtgcttgtgataataaactatgcttcaaaaaggcaatgtagagt 440
Query: 240 gggctggagtttgtgagtgtgattgtgtgtgtatatgtgtttg 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctggagtttgtgagtgtgattgtgtgtgtatatgtgtttg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
