Query= MSMg01no173_d20.b1 MSMg01no173_d20.b1 CHROMAT_FILE:
MSMg01no173_d20.b1 PHD_FILE: MSMg01no173_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:52 2005
(315 letters)
>mm_chr6_45078129_45078843
Length = 715
Score = 596 bits (308), Expect = e-175
Identities = 308/308 (100%)
Strand = Plus / Plus
Query: 5 gaattcatttgtgagaagatgtatttcaagagttaacagaatgtatttgattaatttctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttgtgagaagatgtatttcaagagttaacagaatgtatttgattaatttctt 264
Query: 65 atttttggaagtttcttagtttctttacattggccatgcttagtgacctggaaagagccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttttggaagtttcttagtttctttacattggccatgcttagtgacctggaaagagccc 324
Query: 125 ttcaaacttctaccaatggcagagatcatacaccttctgtgtagtatcaaagctatagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcaaacttctaccaatggcagagatcatacaccttctgtgtagtatcaaagctatagga 384
Query: 185 tataatctctggaacactgagtgatatcactacatgaaccactttctccaatgaatactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tataatctctggaacactgagtgatatcactacatgaaccactttctccaatgaatactt 444
Query: 245 tctcttccacaagcaaagcatttttcctcaaacagtgtcagtttctccttgtgttcatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctcttccacaagcaaagcatttttcctcaaacagtgtcagtttctccttgtgttcatca 504
Query: 305 caggaaaa 312
||||||||
Sbjct: 505 caggaaaa 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_d20.g1 MSMg01no173_d20.g1 CHROMAT_FILE:
MSMg01no173_d20.g1 PHD_FILE: MSMg01no173_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:52 2005
(288 letters)
>mm_chr6_45144720_45145407
Length = 688
Score = 513 bits (265), Expect = e-150
Identities = 275/279 (98%), Gaps = 2/279 (0%)
Strand = Plus / Minus
Query: 1 tatatattggttagtaaaattactgatgctgtgttacagtgcttggcttggacatctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tatatattggttagtaaaattactgatgctgtgttacagtgcttggcttggacatctgtg 569
Query: 61 atttaattaggatttctgaccttctgactcttatcaatacattataaatttaaaactata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atttaattaggatttctgaccttctgactcttatcaatacattataaatttaaaactata 509
Query: 121 taggtgtgtgtgtgtgtgtgtgtgtgtgtgtatacctgtgtcaaatatatatgcatatat 180
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tag--gtgagtgtgtgtgtgtgtgtgtgtgtatacctgtgtcaaatatatatgcatatat 451
Query: 181 atgtaaacatcttctttctgtatcttgaaaagtaaaaacattaacattttgttaagtacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atgtaaacatcttctttctgtatcttgaaaagtaaaaacattaacattttgttaagtacg 391
Query: 241 tttctataagtcctgttaatgcccttctttttttttttt 279
||||||||||||||||||||| |||||||||||||||||
Sbjct: 390 tttctataagtcctgttaatgtccttctttttttttttt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
