Query= MSMg01no174_e14.b1 MSMg01no174_e14.b1 CHROMAT_FILE:
MSMg01no174_e14.b1 PHD_FILE: MSMg01no174_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:07 2005
(287 letters)
>mm_chr6_112908129_112908816
Length = 688
Score = 478 bits (247), Expect = e-139
Identities = 265/271 (97%), Gaps = 3/271 (1%)
Strand = Plus / Plus
Query: 15 gaattca-ttaaaacggcttttggactcaatcgctttaggaaatgaaatcaacattaggc 73
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattcaattaaaacggtttttggactcaatcgctttaggaaatgaaatcaacattaggc 274
Query: 74 tgaataatatatttttcctg-aagttagggtcccttctgggttctctttaagcagaaaga 132
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgaataatatatttttt-tgcaagttagggtcccttctgggttctctttaagcagaaaga 333
Query: 133 taattcagaacagacgttaagtccagttttatgtcaactcagtgaggattaggtcatcta 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 taattcagaacagacgttaagtccagttttatgtcaactcagtgaggattaggtcatcta 393
Query: 193 cattaacccatagcgctaagatcaacttccccagcaccacggcctctccaacagccctaa 252
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cattaacccatagtgctaagatcaacttccccagcaccacggcctctccaacagccctaa 453
Query: 253 gtgaggactgagaaagattcagcctccaggg 283
|||||||||||||||||||||||||||||||
Sbjct: 454 gtgaggactgagaaagattcagcctccaggg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_e14.g1 MSMg01no174_e14.g1 CHROMAT_FILE:
MSMg01no174_e14.g1 PHD_FILE: MSMg01no174_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:07 2005
(292 letters)
>mm_chr6_113063453_113064144
Length = 692
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Minus
Query: 1 tcttattccaccaaaagtgttccagggattacactcaagttgtcaggctccgcagcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 513 tcttattccaccaaaagtgttccagggattacactcaagttgtcaggcttggcagcaagt 454
Query: 61 tcctttacctgttcactcaccttgctgacctaaaacactggctaagagttgtgtcttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcctttacctgttcactcaccttgctgacctaaaacactggctaagagttgtgtcttgta 394
Query: 121 ggaaagctcttggttttgagattaaaaattcaaatgctattctctttatattcctatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggaaagctcttggttttgagattaaaaattcaaatgctattctctttatattcctatagc 334
Query: 181 tactacctgtatctttatgaaagttttcattaattccaaagacaaaatttataacttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tactacctgtatctttatgaaagttttcattaattccaaagacaaaatttataacttaac 274
Query: 241 ttaaaaattataatataattaaagtaaaacctttttttttttcctattt 289
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 273 ttaaaaattataagataattaaagtaaaacctttttttttttcctattt 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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