Query= MSMg01no174_l06.b1 MSMg01no174_l06.b1 CHROMAT_FILE:
MSMg01no174_l06.b1 PHD_FILE: MSMg01no174_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:38 2005
(313 letters)
>mm_chr6_30913094_30913806
Length = 713
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%)
Strand = Plus / Plus
Query: 5 gaattcttattcccccttaacaaaggtttatttaaatattttttacaagtttattgtctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttattcccccttaacaaaggtttatttaaatattttttacaagtttattgtctg 264
Query: 65 tgatcctttcacacgggcagctttgtctgataatgactctttctttccatatacagatgc 124
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatcctttcaaatgggcagctttgtctgataatgactctttctttccatatacagatgc 324
Query: 125 atgtttactttctgtgtttgtttttcttaatccctgacacttgtgctgcgtgtaacactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtttactttctgtgtttgtttttcttaatccctgacacttgtgctgcgtgtaacactt 384
Query: 185 ccttgtgatttctcaaacatttgttttccagaagaacactcttcctggatttccctgcta 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccttgtgatttctcaaacattcgttttccagaagaacactcttcctggatttccctgcta 444
Query: 245 ttaggtcccttgagtgtgtctgtagccaatgtttactgtgtgagctcttgggacttggct 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 ttaggtcccttgagtgtgtctgtagccagtgtttactgtgtgagctcttgggacttggct 504
Query: 305 cctgga 310
||||||
Sbjct: 505 cctgga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_l06.g1 MSMg01no174_l06.g1 CHROMAT_FILE:
MSMg01no174_l06.g1 PHD_FILE: MSMg01no174_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:38 2005
(161 letters)
>mm_chr6_31068664_31069223
Length = 560
Score = 296 bits (153), Expect = 5e-85
Identities = 159/161 (98%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 1 agatccccagcccccacataaaggccagggtctgagggtcacgtctgtagtcacagctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agatccccagcccccacataaaggccagggtctgagggtcacgtctgtagtcacagctac 301
Query: 61 actgggaggtagggggtaggggtggcctagggggtacaaagactaggggacccctatcta 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 300 actgggaggtagggggtaggggtggccta-ggggtacaaagactaggggacccctatcta 242
Query: 121 accagttggtctggttggtatggtagtttccaggttctggg 161
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 accagttggtctggttgggatggtagtttccaggttctggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 560
Length adjustment: 8
Effective length of query: 153
Effective length of database: 552
Effective search space: 84456
Effective search space used: 84456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
