CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGAAGTTAGACTCCAGAGAACCAAATAACCTTATTAAAAATGAG
GTACACACCCAAGAGGAGTAGACCGCAGGAAATAATCAAACTCAGGGGTG
AAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACG
AGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAG
ACTCACTAGAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAACTG
AAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGA
TCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAAT
GGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAG
TTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATA
AATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACAGGTTTAGTGCAGA
GTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTTT
TTCACAAGATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCC
ACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAA
CTTCAGACCAATTTCTCTTATGAAT

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTCCCAGCCTGCCAGCAGAGAGA
CCTTCTTCACAGATGCGCGCACATGGGCTCTCCTTGGAGGTTTTATCTAG
AAAGCCTGGTTTGCAGTCAGTGTCTGCATCACCTCAGACTCGTGCCCTGT
CAGCGTTAAAGTCGAAGTTACTGATGTTCCTCAAACTGCCAGAAATGCTA
AAAGTCAGGTTATATTGAATCCCTTGAGAGTTATAGTATGTTTTTAAAAA
ACAAAGACACGTTTTTGAAAAGATTTCAGATAAGATAGGGAAGTCTTCAG
AATTTAGGAGCCAACTTTCTTTTTGCTATAAGAGCAAGAACTGTGTCTAG
TGACAACCACTATGAATTACCCATACACAGTGAAGACTCAGGGTTGGAAA
TGGGCTAAGAAACACAAGAATAAGTTGGAGGGGTGAGAGGAAATTTTAAT
TATTTTTTANAAAAGGTTTCTGTGTAGAACTATTATTGATGTGTTTTAGG
AGCCTTATCTTTCCCCCGTTTTTACGCCTTTTTGGTATCTCGATATCATC
TTCCCCCCTTGTAGCCGTTCTTCACCCCCCAACCTACACATTTTTTTCAC
TGTTATATTATCTACGTACTGTATTTTATACACTTATCACATATTTTTCC
CCCCTTTTTTTTCTCCCTCCCCTATTCCCCT

Query= MSMg01no178_k17.g1 MSMg01no178_k17.g1 CHROMAT_FILE:
MSMg01no178_k17.g1 PHD_FILE: MSMg01no178_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:31 2005
         (435 letters)



>mm_chr6_21788115_21788949
          Length = 835

 Score =  801 bits (414), Expect = 0.0
 Identities = 429/434 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttcccagcctgccagcagagagaccttcttcacagatgcgcgcacatgggctctcctt 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 634 acttcccagcctgccagcagagagaccttcttcacagatgggcgcacatgggctctcctt 575

                                                                       
Query: 61  ggaggttttatctagaaagcctggtttgcagtcagtgtctgcatcacctcagactcgtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggaggttttatctagaaagcctggtttgcagtcagtgtctgcatcacctcagactcgtgc 515

                                                                       
Query: 121 cctgtcagcgttaaagtcgaagttactgatgttcctcaaactgccagaaatgctaaaagt 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cctgtcagcattaaagtcgaagttactgatgttcctcaaactgccagaaatgctaaaagt 455

                                                                       
Query: 181 caggttatattgaatcccttgagagttatagtatgtttttaaaaaacaaagacacgtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 caggttatattgaatcccttgagagttatagtatgtttttaaaaaacaaagacacgtttt 395

                                                                       
Query: 241 tgaaaagatttcagataagatagggaagtcttcagaatttaggagccaactttctttttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgaaaagatttcagataagatagggaagtcttcagaatttaggagccaactttctttttg 335

                                                                       
Query: 301 ctataagagcaagaactgtgtctagtgacaaccactatgaattacccatacacagtgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 334 ctataagagcaagaactgtgtctagtgacaaccactatgaattaggtatacacagtgaag 275

                                                                       
Query: 361 actcagggttggaaatgggctaagaaacacaagaataagttggaggggtgagaggaaatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 actcagggttggaaatgggctaagaaacacaagaataagttggaggggtgagaggaaatt 215

                         
Query: 421 ttaattatttttta 434
           ||||||||||||||
Sbjct: 214 ttaattatttttta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space:   351876
Effective search space used:   351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)