TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTAAAAATCTTCGTATATTTTTTTCCAAAGATGTGCATATACAAACCCT
TGACAAATCATTTATTAATCATAATATTGATTGGTTTTGTTTCTGGGTGT
TCCTGAAATGTGTACCAGATGCAGGAATGTCATGTATGCCACAGAGTATT
TGTAGAGGACAGAGGACAATTTTGTGGAGTAAGGTGTCTCTTCTTACCTA
TAAATGGACTAGGGGTATTAAATTTAGTTTACCAGGTTTGTGAGTCGAGT
GACTTTACTTACTTTACAGAGCCATTTCTCCAGCCCCCGATATTTCATTG
TTGTTATTACTATACTTATCCAATGTATGAGACGTAAAAATATCAGAAAT
ATCTTTAACAACTTAACATCAGAAATACCATAAATCTTTAACAGCATAAG
AACTCTGGTTCTTTTTGTCATTGTGCTCATCCATGGGCAGTCTCTTGAAT
CATATTTACCTGTTGTCCACAATATGGTATTGCAGACAGCACACTAGGTG
GTCCACAGCTTCTACATACTGCTGTCCAATGTCACAGGTCAATTGTGGCT
TGCACTTCTGCTCCAAGAAAACGAGCCTCTAAGGTAAGGACAACCATATA
TCTTTAACTCAACTTCCACTTTTTGTTGGAAGAAAGCAATGTTATAGAAA
GCAAGACTTTACTATGCAGC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGCCAGAGAA
GCACCTGAAAAAAATTTTCACCATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAA
AAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACAC
TCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCAGAATATTGGACATAGTACTACCGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCTAGAAGATGTCCCAACCGGTAAGAAGA
ATACATGCTCCACTGTGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATTTACACAATGGAATACTACTCATCTATTAAAAAAGATGAATTTA
TGAAATTCCTAGGCAAATGGGTGGACCTGGAGGGTATCATCTTGAGTGAA
GTAACCCAATCACAAAGGAACTCGCACAATATGTACTCACTGAGAAGTGG
ATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACAACTTGCCA
AACACATGGAATTCAAGAAGAACG

Query= MSMg01no179_j07.b1 MSMg01no179_j07.b1 CHROMAT_FILE:
MSMg01no179_j07.b1 PHD_FILE: MSMg01no179_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:38 2005
         (647 letters)



>mm_chr6_75854714_75855766
          Length = 1053

 Score =  890 bits (460), Expect = 0.0
 Identities = 533/562 (94%), Gaps = 11/562 (1%)
 Strand = Plus / Minus

                                                                        
Query: 92   ggttttgtttctgggtgttcctgaaatgtgtaccagatgcaggaatgtcatgtatgccac 151
            |||||||||||||||||||||||||| |||| |||||||  ||||||||||| |||||||
Sbjct: 1053 ggttttgtttctgggtgttcctgaaacgtgtgccagatgtgggaatgtcatgcatgccac 994

                                                                        
Query: 152  agagtatttgtagaggacagaggacaattttgtggagtaaggtgtctcttcttacctata 211
            || |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  agcgtacgtgtcgaggacagaggacaattttgtggagtaaggtgtctcttcttacctata 934

                                                                        
Query: 212  aatggactaggggtattaaatttagtttaccaggtttgtgagtcgagtgactttacttac 271
            |||||||||||||||||||||||||||||||||||||||| ||| |||||||    ||||
Sbjct: 933  aatggactaggggtattaaatttagtttaccaggtttgtgtgtcaagtgact----ttac 878

                                                                        
Query: 272  tttacagagccatttctccagcccccgatatttcattgttgttattactatacttatcca 331
            ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 877  ttt-cagagccatttctccagcccccgatatttcattgttgttattcctatacttatcca 819

                                                                        
Query: 332  atgtatgagacgtaaaaatatcagaaatatctttaacaacttaacatcagaaataccata 391
            ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 818  atgtatgagacataaaaatatcagaaatatctttaacaacttaatataagaaataccata 759

                                                                        
Query: 392  aatctttaacagcataagaactctggttct-ttttgtcattgtgctcatccatgggcagt 450
            |||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||
Sbjct: 758  aatctttaacagcataagaactctggttctcttgtgtcattgtgctcatccacaggcagt 699

                                                                        
Query: 451  ctcttgaatcatatttacctgttgtccacaatatggtattgcagacagcacactaggtgg 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698  ctcttgaatcatatttacctgttgtccacaatatggtattgcagacagcacactaggtgg 639

                                                                        
Query: 511  tccacagcttctacatactgctgtccaatgtcacaggtcaattgtggcttgcacttctgc 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638  tccacagcttctacatactgctgtccaatgtcacaggtcaattgtggcttgcacttctgc 579

                                                                        
Query: 571  tccaagaaaacgagcctctaaggtaaggacaaccatatatcttt-----aactcaacttc 625
            ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||
Sbjct: 578  tccaagaaaacgagcctctaaggtaaggacaaccatatatctttagttaaactcaacttc 519

                                  
Query: 626  cactttttgttggaagaaagca 647
            ||||||||||||||||||||||
Sbjct: 518  cactttttgttggaagaaagca 497


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1053
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1043
Effective search space:   664391
Effective search space used:   664391
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)