CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTTTAAAGCACATTACTACATCTTCTATGATTAAATATTATGCC
AAAACAATTTATTTTATTCTTATTGGTTAATATTATGGACTAATTCCTAT
AATTTAGATTGCTTTTCATTAGACGACCATACTTACTATACTAATTCCAT
TGATCCATGAGTGTTGGAGATCTTTCTATCTTCTGATACTTCTTTAATTT
CTTTTTAAAATGTCTTTAAGGATTTTTCATTTGTTTGGTTAGAGTTATCC
CAAGACAATTTATATGATGTAAGGCTATTATTACAGGTATTAAATTAAAC
TCATAGCAACTCAATGACTCACTACTCAATAAAAAATGGGTCAAGACAGA
AAACAAGAATGATATCCCCACCTTATAACAGCAAATGAAAATGAAAGCAG
GAATACTTAAAACATATTTAAGACAGCTAAGGCAGCTCTAATAGGCAGGG
TTATAGTACTAAGTGCCTATACCAAAATATCAGAGTGATATCTTATTAAT
AACTTAAAGTCATCATGACAACAGGAAGAACAATATCCCAAAGGAGTATG
TAGTGAGAAATAATCTTACTCAGTACTCCTATTATGATTTTTATTTTTAA
CTTAGCCCCCTAGGAAAAGGTGAAAAGATAATCTGTTTCTTTGAAACTAC
CAGTAATTCTGATTTTCCATA

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACACACATTTGACTATTTCTAAAAT
TAGGCTGGGGAATTGTATCAGTGGTAAAGTGATGTGCTGTACAACACAAG
GAACTGAGTTAAGTTCCCTAGAACCCAAAAGGCCAGGTAAAGTGGTACGC
ACCTGTAAAACAAGTACTGGGAAAAGATTGAGATAAGCAGGTTCCATGAG
CCAGGTGACAAGAGTTCTTGTTTATAGTGCACCATCTAGGTTCAGTGAGA
CCTTGTCTCAAACAGTACAGTGCATAACCGTAGAAGATAGTGGATATTGA
CCTCTGACCCCTAAATGCAGAGATATGTGAATACAGGTATGCACATACAT
TCATGAAAATTATGCCCACACTTATGTTCAAAAAACACTCCAAATAAACA
ATTATTATAGATAAAAATAATTTAAGATTATAATAATCTATTTTCAGACT
TTATTGTTCTAATAAAAATGCAGAGTATAAAGCTTACTGCCTTAAACCTT
TAAAAGTGTATCGCTCAGCATGGCTTCAGGAATCATGCAGTTGGCCTGGA
CTTGATACCTTACGGGGCACATGTCATATGTTTTTCTGGTTATAATCTAT
GGCTCCCCCAGTTCCTATCAACACCATTGTATTCCCTTAGTCATTGAAAC
TTCCCGCTGCTTTTTGTTTTTCCN

Query= MSMg01no179_m11.b1 MSMg01no179_m11.b1 CHROMAT_FILE:
MSMg01no179_m11.b1 PHD_FILE: MSMg01no179_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
         (365 letters)



>mm_chr6_75757059_75757823
          Length = 765

 Score =  574 bits (297), Expect = e-168
 Identities = 303/305 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtttaaagcacattactacatcttctatgattaaatattatgccaaaacaatt 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gaattctgtttaaagaacattactacatcttctatgattaaatattatgccaaaacaatt 250

                                                                       
Query: 65  tattttattcttattggttaatattatggactaattcctataatttagattgcttttcat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tattttattcttattggttaatattatggactaattcctataatttagattgcttttcat 190

                                                                       
Query: 125 tagacgaccatacttactatactaattccattgatccatgagtgttggagatctttctat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tagacgaccatacttactatactaattccattgatccatgagtgttggagatctttctat 130

                                                                       
Query: 185 cttctgatacttctttaatttctttttaaaatgtctttaaggatttttcatttgtttggt 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 129 cttctgatacttctttaatttctttttaaaatgtctttaaggatttttcacttgtttggt 70

                                                                       
Query: 245 tagagttatcccaagacaatttatatgatgtaaggctattattacaggtattaaattaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tagagttatcccaagacaatttatatgatgtaaggctattattacaggtattaaattaaa 10

                
Query: 305 ctcat 309
           |||||
Sbjct: 9   ctcat 5


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space:   269136
Effective search space used:   269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no179_m11.g1 MSMg01no179_m11.g1 CHROMAT_FILE:
MSMg01no179_m11.g1 PHD_FILE: MSMg01no179_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
         (517 letters)



>mm_chr6_75613017_75613933
          Length = 917

 Score =  922 bits (477), Expect = 0.0
 Identities = 507/517 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacacatttgactatttctaaaattaggctggggaattgtatcagtggtaaagtgatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacacatttgactatttctaaaattaggctggggaattgtatcagtggtaaagtgatgt 260

                                                                       
Query: 61  gctgtacaacacaaggaactgagttaagttccctagaacccaaaaggccaggtaaagtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgtacaacacaaggaactgagttaagttccctagaacccaaaaggccaggtaaagtgg 320

                                                                       
Query: 121 tacgcacctgtaaaacaagtactgggaaaagattgagataagcaggttccatgagccagg 180
           || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcacctgtaaaacaagtactgggcaaagattgagataagcaggttccatgagccagg 380

                                                                       
Query: 181 tgacaagagttcttgtttatagtgcaccatctaggttcagtgagaccttgtctcaaacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacaagagttcttgtttatagtgcaccatctaggttcagtgagaccttgtctcaaacag 440

                                                                       
Query: 241 tacagtgcataaccgtagaagatagtggatattgacctctgacccctaaatgcagagata 300
           ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagtgaagaaccatagaagatagtggatattgacctctgacccctaaatgcagagata 500

                                                                       
Query: 301 tgtgaatacaggtatgcacatacattcatgaaaattatgcccacacttatgttcaaaaaa 360
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 501 tgtgaatacaggtatgcacatacattcatgaaaattatgcatacacttatgttcaaaaaa 560

                                                                       
Query: 361 cactccaaataaacaattattatagataaaaataatttaagattataataatctattttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactccaaataaacaattattatagataaaaataatttaagattataataatctattttc 620

                                                                       
Query: 421 agactttattgttctaataaaaatgcagagtataaagcttactgccttaaacctttaaaa 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agactttattgttctaataaaaatgcagagtataaagcttactgccttaatcctttaaaa 680

                                                
Query: 481 gtgtatcgctcagcatggcttcaggaatcatgcagtt 517
           ||||||||||||||| || ||||||||||||||||||
Sbjct: 681 gtgtatcgctcagcaaggtttcaggaatcatgcagtt 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)