GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACACATATAAAAA
GCCAAGCACGGTGGTATGTGCTTATAGTTGCAGTGTTGTGGGAGCAGAGA
TGGGCTCACTGGCTGGCCAACCTAGCCAGGTCCAGCTTGGCAACTCCAAG
TCTATGAGAGCGTTGTCCCCCAAAAACAAGGTAGGTAGCACCTGAAGAAT
GACACCCAAGGTTGTCTTCTGGCCTCCACATAGATGTACACTCTCACATG
TAGGTGTAAACCCCCCCACACCCACACAATTAAATAGTGTACTGAATATT
GTAATTGTATACATTTTTTATTGTGCCCCCCCCCCCCCCATATTCCTTCA
AGGTGCTTTAAGGTATAGCACCCCCCTCACTAAAATTCAAGATGCATCCA
CTATTTGTTGATGCCCCCACCTTGTTGTTGCGCTTTTATATATGCTTTGC
GATCCCTGTTCCCTTCCTGTCCCTTCCTTTTTTTCCCTTTTCTCCCCTTT
TTTTTTTCACCCCCCCCCTTTTTTTTTTTCTACCCCTTTTTTCCTCCCCC
CCCCCCTCTCCCCTTCCATTTTTTTTCCCCCCCCCCCCCCCCCCCCCTTT
TTTTTTTTTCTACTCATTCTTCATCCCCCCCCCTTTTTTTTTCCATTTTT
TTTTTCCTCCCCACCCCCCCACCCTCCTATTATAACCCCAATTATATAAT
TCCTCTCTCTCTTTTATAAAN

TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAAGTTCGAACCCTGGGCAAGTGATGATAATGGTCTGTATCATTT
ATATTGTGGTCCCCAAGGAAGATGCAGAATCAAGGCTCCAAGAACATGGA
GCCAGGCTGGCCAGCTGTTTGCCCAGTGGAGCTCTGTGCTAGCTCAGAGG
TCACATGCTTCTCAAAGCTTGCCAGCACAGTACCCGGTTGTTTGTTTGTT
TCCATCTTCCCTGTAAACAGTTTGGTCTCCTTCCAGGGGAACAAAGCTAA
TGTGAGCAGAGCAAACACACGCACATGCTACCCACAGGGATCTACCCTGG
CATCTAAGAAAGCCAGCTTTTTCTAGGGCAAGAAGAGGCTTAAAGAGGAA
GAACCTGGCTTTTCTCACCCCCTCAGCTCCTGCTGAGGATGGAATAATAC
ATTTGAAAAACACACCGGAGCCCTTTCGTTAGGGAGTGATGCTAAAATTG
GCTCTTCCAGTTTGTAATAAAAGAAAACAGACCTTAGGATTCTAGCTTGG
CTAGCATTCTTATAGAGTCTTCAAAAATTCGTCCCCTTTCAGGATCACCT
CATGTATGGCAAGAATAAGCTATGTCCATGTTAATTTTTACTGGTGACAT
TTTTCTTATTATTTCCCCCCCCGCCTGATTTTTTCTTTTCTCTTTTTCCC
CCCCCCGTCTTATTACTCTCCCTCCCTCTTATTCCTCATTTTTTTTTG

Query= MSMg01no181_j18.g1 MSMg01no181_j18.g1 CHROMAT_FILE:
MSMg01no181_j18.g1 PHD_FILE: MSMg01no181_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:07 2005
         (466 letters)



>mm_chr6_99484286_99485151
          Length = 866

 Score =  847 bits (438), Expect = 0.0
 Identities = 456/462 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaagttcgaaccctgggcaagtgatgataatggtctgtatcatttatattgtg 64
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaagttcgaattctgggcaagtgatgataatggtctgtatcatttatattgtg 264

                                                                       
Query: 65  gtccccaaggaagatgcagaatcaaggctccaagaacatggagccaggctggccagctgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtccccaaggaagatgcagaatcaaggctccaagaacatggagccaggctggccagctgt 324

                                                                       
Query: 125 ttgcccagtggagctctgtgctagctcagaggtcacatgcttctcaaagcttgccagcac 184
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcccagtggagctctgtgctggctcagaggtcacatgcttctcaaagcttgccagcac 384

                                                                       
Query: 185 agtacccggttgtttgtttgtttccatcttccctgtaaacagtttggtctccttccaggg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtacccggttgtttgtttgtttccatcttccctgtaaacagtttggtctccttccaggg 444

                                                                       
Query: 245 gaacaaagctaatgtgagcagagcaaacacacgcacatgctacccacagggatctaccct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaacaaagctaatgtgagcagagcaaacacacgcacatgctacccacagggatctaccct 504

                                                                       
Query: 305 ggcatctaagaaagccagctttttctagggcaagaagaggcttaaagaggaagaacctgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcatctaagaaagccagctttttctagggcaagaagaggcttaaagaggaagaacctgg 564

                                                                       
Query: 365 cttttctcaccccctcagctcctgctgaggatggaataatacatttgaaaaacacaccgg 424
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttttctcagggcctcagctcctgctgaggatggaataatacatttgaaaaacacaccgg 624

                                                     
Query: 425 agccctttcgttagggagtgatgctaaaattggctcttccag 466
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agccctttcgttagggagtgatgctaaaattggctcttccag 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)