Query= MSMg01no182_c12.b1 MSMg01no182_c12.b1 CHROMAT_FILE:
MSMg01no182_c12.b1 PHD_FILE: MSMg01no182_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:49 2005
(366 letters)
>mm_chr6_15041367_15042128
Length = 762
Score = 596 bits (308), Expect = e-175
Identities = 344/358 (96%), Gaps = 4/358 (1%)
Strand = Plus / Minus
Query: 7 ggaattcacaatatcctctatttctggatggaagatagaatttggatatatgttgactaa 66
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaattcacaataaaatgtatttctggatggaagatagaatttggatatatgttgactaa 501
Query: 67 tatgaaagaaatacatatacaacaccagaataaaaggatgttcagaagctaacatatgga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatgaaagaaatacatatacaacaccagaataaaaggatgttcagaagctaacatatgga 441
Query: 127 ggtatttaaaaaatactggataaataattgaattctatactttaccatatacattaaact 186
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtatttaacaaatactggataaataattgaattctatactttaccatatacattaaact 381
Query: 187 agaaagtctttcagttttcttccaataggacacaaaacatacctattcttagacattcca 246
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 agaaagtctttcagttttcttccaatagaacacaaaacatacctattcttagacattcca 321
Query: 247 caaatatccagagacagagacataggaactccgagcatgggataatcacatggaagaaaa 306
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 320 caaatatacagagacagagacacaggaacttcgagcatgggataatcacatggaagaaaa 261
Query: 307 acagtcaaagtcactgtcaagtaccaaagtttctctcaattgttaacagagaaaaatg 364
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 a----caaagtcactgtcaagtaccaaagtttctctcaattgttaacagagataaatg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 762
Length adjustment: 9
Effective length of query: 357
Effective length of database: 753
Effective search space: 268821
Effective search space used: 268821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_c12.g1 MSMg01no182_c12.g1 CHROMAT_FILE:
MSMg01no182_c12.g1 PHD_FILE: MSMg01no182_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:49 2005
(338 letters)
>mm_chr6_14887268_14888005
Length = 738
Score = 621 bits (321), Expect = 0.0
Identities = 333/337 (98%)
Strand = Plus / Plus
Query: 1 aataagtttttattaaataaatggctgaataaagaaatgatttatctacaaatgctctgc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aataagtttttattaaataaatggctgaataaagaaatgatttatctagaaatgctctgc 260
Query: 61 tttttacaagttttaagatgacatcagtagagataatacctctaagtcaagcacttctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttacaagttttaagatgacatcagtagagataatacctctaagtcaagcacttctga 320
Query: 121 ttgtgatatgaaaggtgtgtgtgtatgttcaaaaaatctgtaggttatgtagtttttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgatatgaaaggtgtgtgtgtatgttcaaaaaatctgtaggttatgtagtttttaag 380
Query: 181 attatgatctttaaaatgctcagatttaaattgactcatatgaaacatgaacagtgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatgatctttaaaatgctcagatttaaattgactcatatgaaacatgaacagtgaaaa 440
Query: 241 gttatcatgtgataccctttgggaatatctagtagtatgaatcctaggtataggtaaaga 300
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 441 gttatcatgtgataccctttgggaatatctagtagtatgaatcctaggcacaggtaaaga 500
Query: 301 gaatttccctgtggatcatatctttccctgttgaatt 337
||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gaattcccctgtggatcatatctttccctgttgaatt 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
