Query= MSMg01no182_g20.b1 MSMg01no182_g20.b1 CHROMAT_FILE:
MSMg01no182_g20.b1 PHD_FILE: MSMg01no182_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:10 2005
(240 letters)
>mm_chr6_130353468_130354107
Length = 640
Score = 429 bits (222), Expect = e-125
Identities = 234/238 (98%)
Strand = Plus / Plus
Query: 1 aattctagatctgaagtaatgcattataggtacactggtccacgtacttttgtgcaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aattctagatctgaagtaatgcattataggtacactggtccacgtacttttgtgcactta 260
Query: 61 ccaatgtttcattatctgtattacatgttcttcttaccttatgagaaataagagttatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaatgtttcattatctgtattacatgttcttcttaccttatgagaaataagagttatat 320
Query: 121 aaaggaggttttgttgttcatagtctgtgctcctgattatgtttatgccttcaattgtat 180
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aaaggaggttttgttgttcatagcctgtgctcctgattatgttgatgccttcaattgtat 380
Query: 181 gcccaccttcaaaaatttttcaagttgaatatattaaactgtgtgcagtttttgtagc 238
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccaccttcaaagatttttcaagttgaatatattaaactgtgtgcagtttttgtagc 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no182_g20.g1 MSMg01no182_g20.g1 CHROMAT_FILE:
MSMg01no182_g20.g1 PHD_FILE: MSMg01no182_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:10 2005
(340 letters)
>mm_chr6_130435410_130436149
Length = 740
Score = 629 bits (325), Expect = 0.0
Identities = 337/341 (98%), Gaps = 2/341 (0%)
Strand = Plus / Minus
Query: 1 agtcctaaaaaaagtattgtaggtccttatttttgtaattttgtcattagaaagattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 540 agtcctaaaaaaagtattgtaggtccttatttttgtaattttgtcattagaaagattatt 481
Query: 61 tgtttccatattgaagattcattttcacaaagggaagttttattaattaatgagttccac 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 480 tgtttccatattgaagattcattttcacagagggaagttttattaattaatgagttccac 421
Query: 121 caattttttatcatgttattgtattttagtgaataattatgactttcataat-attataa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 420 caattttttatcatgttattgtattttagtgaataattatgactttcataataatt-taa 362
Query: 180 actatctatcatatttcatgaaatatcatctgatatgcataatgtttataaaattgttca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actatctatcatatttcatgaaatatcatctgatatgcataatgtttataaaattgttca 302
Query: 240 tttgtaagaaaattgctgcacttctgagcttaatctgtatgatcctcacattggtactgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgtaagaaaattgctgcacttctgagcttaatctgtatgatcctcacattggtactgt 242
Query: 300 ttcatgcattatgcatgttattgttttgacctaactcagaa 340
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcatgcattatgcatgttattgttttgacctaactcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
