Query= MSMg01no182_i10.b1 MSMg01no182_i10.b1 CHROMAT_FILE:
MSMg01no182_i10.b1 PHD_FILE: MSMg01no182_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:17 2005
(303 letters)
>mm_chr6_98161211_98161913
Length = 703
Score = 549 bits (284), Expect = e-161
Identities = 296/300 (98%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaattcctgagagagtacagaaaaaaataacgtgaaaaaatga-tttttttaa 63
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 478 gaattcttaatttttgagagagtacagaaaaaaataacgtgaaaaaatgattttttttaa 419
Query: 64 aaaaatgtatgttttctggacagcaggaaagcagtcagttatttctggagtttgcattgc 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaaaa-gtatgttttctggacagcaggaaagcagtcagttatttctggagtttgcattgc 360
Query: 124 atataaatatcacagagccaaatcttgccctccaatggtttttcttctggttgcctgagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atataaatatcacagagccaaatcttgccctccaatggtttttcttctggttgcctgagt 300
Query: 184 ccatatgtttctagaagttcaatttgtttccttgtatttcaaggtataatcatttaacta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccatatgtttctagaagttcaatttgtttccttgtatttcaaggtataatcatttaacta 240
Query: 244 ctatttcataggcagaatctccatgaaattaaatttgtgtgtgtgtgtgtgtgtgtgtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctatttcataggcagaatctccatgaaattaaatttgtgtgtgtgtgtgtgtgtgtgtgt 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_i10.g1 MSMg01no182_i10.g1 CHROMAT_FILE:
MSMg01no182_i10.g1 PHD_FILE: MSMg01no182_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:17 2005
(304 letters)
>mm_chr6_98015659_98016362
Length = 704
Score = 542 bits (280), Expect = e-158
Identities = 298/304 (98%)
Strand = Plus / Plus
Query: 1 atttgaagatatttccaatgacctcagaggtgcaaaactctcagctcatctcaaaatctg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgaagatatttccaatgacatcagaggtgcaaaactctcagctcatctcaaaatctg 260
Query: 61 cccataattttggctctttaaacatattaatcaaatctcccaaataactccccatcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 cccataattttggctctttaaacatattaatcaaatctcccaaataactccccgtcttca 320
Query: 121 agtgttgaaatcatataacatttctccttattttttcactgtttacagagatttcttata 180
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 321 agtgttgaaatcatataacatttctccttatattttctctgtttacagagatttcttata 380
Query: 181 ttgtaactatgcctccttactgctgtttcaaattcacatttgcagggcagtattcacagg 240
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 381 ttgtaactatgcctccttactgctgtttaaaatttacatttgcagggcagtattcacagg 440
Query: 241 aaataaagctctgattactgagtctgctggctccttgcttctatatgatttctttttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaataaagctctgattactgagtctgctggctccttgcttctatatgatttctttttgta 500
Query: 301 ctat 304
||||
Sbjct: 501 ctat 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
